Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 DDX10P1-201ENST00000448545 1933 ntBASIC3.38□□□□□ -1.87
ABCF3Q9NUQ8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 RNU4-35P-201ENST00000362588 141 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 U3.6-201ENST00000363622 211 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 Y_RNA.372-201ENST00000365599 102 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 BX323014.1-201ENST00000412876 237 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 MRPS10P2-201ENST00000431226 381 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AL139415.2-201ENST00000431968 163 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AL596276.1-201ENST00000434465 418 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 Z99127.3-201ENST00000448158 395 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 RPL23AP67-201ENST00000465341 474 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AL121769.1-201ENST00000469473 401 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 RPS3AP14-201ENST00000483907 780 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 RNU6-1256P-201ENST00000516539 103 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 SNORA67.7-201ENST00000516664 135 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC026403.1-201ENST00000518938 295 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC103843.2-201ENST00000530523 682 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AL133241.1-201ENST00000556832 487 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC060771.1-201ENST00000582031 164 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 DUXAP4-201ENST00000603046 613 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 U3.45-201ENST00000607547 219 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC004832.5-201ENST00000608677 401 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC019176.2-201ENST00000611579 315 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 U4.5-201ENST00000617137 123 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC072046.2-201ENST00000618366 268 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC124864.2-201ENST00000624736 186 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 MIR6863-201ENST00000636112 90 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AC093908.1-201ENST00000623125 8092 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 MTND5P7-201ENST00000413558 1798 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 AL356274.2-201ENST00000624379 3752 ntBASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ABCF3Q9NUQ8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 ELF2P3-201ENST00000445099 1506 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC032011.1-201ENST00000611703 1549 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 RNA5SP197-201ENST00000363357 119 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 Y_RNA.296-201ENST00000364930 108 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 RNU6-282P-201ENST00000365357 103 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 RNU6-198P-201ENST00000384258 104 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 RNU6-114P-201ENST00000384704 105 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 CALM2P3-201ENST00000400429 449 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 GSTA9P-201ENST00000406231 611 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 RN7SKP111-201ENST00000410349 271 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 RN7SKP27-201ENST00000410684 333 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 RNU6-516P-201ENST00000411381 104 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 Z99755.1-201ENST00000414048 380 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 MTND3P17-201ENST00000416968 344 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC007283.2-201ENST00000424739 197 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 ARPC3P1-201ENST00000437218 533 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC108734.1-201ENST00000439549 399 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 C1DP4-201ENST00000455429 424 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC013267.1-201ENST00000458227 267 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 snoU13.28-201ENST00000459235 104 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC055855.1-201ENST00000489563 579 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 RNU6-1220P-201ENST00000517126 108 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AL355836.1-201ENST00000555951 870 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AMZ2P1-203ENST00000565833 850 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC092325.1-201ENST00000566449 554 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 MIR3682-201ENST00000581338 84 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AL162713.1-201ENST00000604480 262 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AL603758.1-201ENST00000618654 241 ntBASIC3.36□□□□□ -1.87
ABCF3Q9NUQ8 AC073308.1-201ENST00000623696 305 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms