Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 MAPK10-320ENST00000641462 6696 ntBASIC5.12□□□□□ -1.59
ZFYVE28Q9HCC9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZFYVE28Q9HCC9 AL445487.1-201ENST00000415694 1580 ntBASIC5.12□□□□□ -1.59
ZFYVE28Q9HCC9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ZFYVE28Q9HCC9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 SNORD46.1-201ENST00000364139 104 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 Y_RNA.333-201ENST00000365274 102 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 Y_RNA.380-201ENST00000365663 111 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 UBBP2-201ENST00000376781 231 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 RNU6-26P-201ENST00000383985 107 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 RNU6-1109P-201ENST00000391187 107 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 USP9YP16-201ENST00000430287 407 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 RPL23AP52-201ENST00000439311 478 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 Z98949.2-201ENST00000440996 144 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 AC011816.1-201ENST00000441346 546 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 USP9YP23-201ENST00000455085 407 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 AC018437.1-201ENST00000492214 406 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 VN1R104P-201ENST00000505115 1009 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 SNRPGP16-201ENST00000533275 226 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 AL121603.1-201ENST00000553815 142 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 HSBP1P1-201ENST00000555205 166 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 SUB1P3-201ENST00000564581 315 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 AC079587.1-201ENST00000603846 277 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 AP001642.1-201ENST00000624727 2117 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 AL592437.2-201ENST00000421655 2434 ntBASIC5.11□□□□□ -1.59
ZFYVE28Q9HCC9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 Y_RNA.485-201ENST00000384395 102 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 RNU6-823P-201ENST00000391042 103 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC097374.1-203ENST00000400783 485 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 SYF2P2-201ENST00000417620 583 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 HMGB1P9-201ENST00000429856 646 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 PTMAP3-201ENST00000447474 330 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 RPL9P32-201ENST00000464118 620 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 MTND3P25-201ENST00000509243 135 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 RNU4-77P-201ENST00000516692 156 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC007991.1-201ENST00000522680 631 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC109446.1-201ENST00000566172 220 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 SNORD84-203ENST00000584275 78 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 MIR548AC-201ENST00000585049 88 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC005344.1-201ENST00000613391 459 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC131238.1-201ENST00000617135 328 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC083843.3-201ENST00000623679 2186 ntBASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ZFYVE28Q9HCC9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 ZNF285B-201ENST00000561698 1767 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 SNORA71.3-201ENST00000362582 128 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 SNORA63.7-201ENST00000365579 123 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 RHOT1P2-201ENST00000366423 333 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 AC063979.1-201ENST00000415539 377 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 RPS15AP6-201ENST00000420703 385 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 RPL35AP21-201ENST00000437667 333 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 IFNWP4-201ENST00000453148 294 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 AC011005.2-201ENST00000487324 359 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 RN7SL691P-201ENST00000494487 301 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 RNA5SP497-201ENST00000516081 97 ntBASIC5.09□□□□□ -1.59
ZFYVE28Q9HCC9 RNA5SP49-201ENST00000516450 115 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms