Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NBPF3Q9H094 AC007529.1-201ENST00000418574 2178 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 RNA5SP90-201ENST00000364801 99 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 MIR539-201ENST00000365690 78 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NBPF3Q9H094 SNORA51.8-201ENST00000384234 132 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NBPF3Q9H094 MTATP6P4-201ENST00000427725 675 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 RPL19P16-201ENST00000433839 588 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.2□□□□□ -1.42
NBPF3Q9H094 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.2□□□□□ -1.42
NBPF3Q9H094 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.2□□□□□ -1.42
NBPF3Q9H094 EEF1B2P7-201ENST00000451177 676 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 AC023424.1-201ENST00000496058 459 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 ATP5F1P5-201ENST00000526403 760 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.2□□□□□ -1.42
NBPF3Q9H094 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.2□□□□□ -1.42
NBPF3Q9H094 AC127455.1-201ENST00000565496 145 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 AC087783.2-201ENST00000605070 562 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NBPF3Q9H094 AC097461.1-201ENST00000568928 2821 ntBASIC6.2□□□□□ -1.42
NBPF3Q9H094 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NBPF3Q9H094 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 ABCC13-202ENST00000463099 3842 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NBPF3Q9H094 MIR1182-201ENST00000408363 97 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 RPL30P13-201ENST00000418873 348 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 EBAG9P1-201ENST00000418955 543 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 AC009127.1-201ENST00000467090 155 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NBPF3Q9H094 RPS27AP9-201ENST00000477681 438 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 AC008749.1-201ENST00000597650 306 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 AL591926.4-201ENST00000616895 298 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 MIR7641-1-201ENST00000627518 61 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NBPF3Q9H094 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NBPF3Q9H094 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NBPF3Q9H094 BCORP1-203ENST00000513194 5093 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 AP001029.2-203ENST00000589795 4910 ntBASIC6.19□□□□□ -1.42
NBPF3Q9H094 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NBPF3Q9H094 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NBPF3Q9H094 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NBPF3Q9H094 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NBPF3Q9H094 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NBPF3Q9H094 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NBPF3Q9H094 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NBPF3Q9H094 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NBPF3Q9H094 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NBPF3Q9H094 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NBPF3Q9H094 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
NBPF3Q9H094 Y_RNA.7-201ENST00000362352 102 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-37P-201ENST00000362692 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 SNORA17.1-201ENST00000362945 126 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-11P-201ENST00000364234 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-7-201ENST00000364784 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU4-11P-201ENST00000365287 132 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-8-201ENST00000365467 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-25P-201ENST00000383873 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-1-201ENST00000383898 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-36P-201ENST00000384172 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-4P-201ENST00000384205 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-5P-201ENST00000384238 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-3P-201ENST00000384314 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-16P-201ENST00000384385 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-15P-201ENST00000384534 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-2-201ENST00000384627 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-29P-201ENST00000384637 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-9-201ENST00000384776 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 MIR192-201ENST00000384915 110 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU5A-5P-201ENST00000411054 116 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 AC073587.1-201ENST00000447093 876 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 AC073901.1-201ENST00000462471 408 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 AC024940.3-201ENST00000538551 316 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 CR383656.7-201ENST00000548164 174 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 MIR4423-201ENST00000580922 80 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 RNU6-6P-201ENST00000606623 107 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 TUG1_4.1-201ENST00000619464 181 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.18□□□□□ -1.42
NBPF3Q9H094 DLD-214ENST00000639772 421 ntTSL 5 BASIC6.18□□□□□ -1.42
NBPF3Q9H094 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NBPF3Q9H094 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NBPF3Q9H094 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.18□□□□□ -1.42
NBPF3Q9H094 MAPK10-328ENST00000641553 4009 ntBASIC6.18□□□□□ -1.42
NBPF3Q9H094 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NBPF3Q9H094 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NBPF3Q9H094 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms