Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC105252.1-201ENST00000503089 286 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 SUMO2P6-201ENST00000505273 288 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC010486.2-201ENST00000505572 483 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC009901.1-201ENST00000506703 541 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 RNA5SP165-201ENST00000517142 115 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 GTF3AP2-201ENST00000557014 266 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 TGIF1P1-201ENST00000558095 802 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 MTND3P12-201ENST00000559068 328 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 MIR5697-201ENST00000578045 78 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AP000860.1-201ENST00000605250 559 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC012360.2-201ENST00000609349 391 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 BX664608.1-201ENST00000610519 487 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 uc_338.25-201ENST00000613756 156 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC007494.3-201ENST00000624660 743 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.84□□□□□ -1.96
SNRNP40Q96DI7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.84□□□□□ -1.96
SNRNP40Q96DI7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 Y_RNA.169-201ENST00000363745 96 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 SNORD115.1-201ENST00000391109 76 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AL021407.1-201ENST00000404531 386 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 RPL36AP53-201ENST00000432891 316 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 MTND1P28-201ENST00000435623 950 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC009296.1-201ENST00000443146 155 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 RNU6-953P-201ENST00000459154 107 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC010468.1-201ENST00000461022 817 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 RPL36AP51-201ENST00000487216 318 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC091826.1-201ENST00000514065 313 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 RN7SKP272-201ENST00000516988 232 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC107934.1-201ENST00000522215 217 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 SUB1P1-201ENST00000524415 382 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AL157394.1-201ENST00000562983 1224 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC020895.1-201ENST00000595362 272 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 WISP1-OT1-201ENST00000602893 642 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AL161798.1-201ENST00000604630 131 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC092354.1-201ENST00000606057 376 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 RNU6-87P-201ENST00000607561 108 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC091931.1-201ENST00000623488 728 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC090617.7-201ENST00000623952 126 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 AC091953.2-201ENST00000623979 160 ntBASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
SNRNP40Q96DI7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 FAM35CP-201ENST00000554755 2470 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 SRP72P2-201ENST00000344851 1979 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 Y_RNA.608-201ENST00000410647 95 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AL358075.3-201ENST00000426289 226 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AL365496.1-201ENST00000426885 215 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC009414.1-201ENST00000427200 443 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC137499.1-201ENST00000427602 88 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AL445567.1-201ENST00000439121 144 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 EPS15P1-201ENST00000448836 336 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 RPL37P4-201ENST00000448908 268 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 RPS4XP2-201ENST00000458402 793 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 RNA5SP471-201ENST00000516971 106 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 MTCO1P47-201ENST00000523889 1271 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC087373.1-201ENST00000524920 491 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC025281.1-201ENST00000567026 265 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms