Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC078785.3-201ENST00000476607 425 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 AC108078.2-201ENST00000510750 236 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 AL117351.2-201ENST00000513571 157 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 RANP9-201ENST00000519957 271 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 OR5AL2P-201ENST00000532185 920 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 AC025678.1-201ENST00000567861 338 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 AC067852.3-201ENST00000589177 561 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 BNIP3P22-201ENST00000593399 556 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 RNVU1-4-201ENST00000612985 164 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 AC025034.2-201ENST00000623264 286 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 AC093648.1-201ENST00000623546 606 ntBASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.26□□□□□ -1.73
CHMP4CQ96CF2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 SNORA63.1-201ENST00000362493 131 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 RNU6-190P-201ENST00000384154 102 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 SNORD115-47-201ENST00000391226 86 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 MTCYBP5-201ENST00000423752 1135 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AC006946.1-201ENST00000429106 328 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AF213884.2-201ENST00000510417 903 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 RNU1-61P-201ENST00000516107 151 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 RNU6-927P-201ENST00000516199 100 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 Y_RNA.704-201ENST00000516851 102 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 RNU6-677P-201ENST00000516914 101 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 RN7SKP60-201ENST00000516985 239 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 OR5AQ1P-201ENST00000527596 927 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AC007621.1-201ENST00000604544 437 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AC006077.1-201ENST00000604746 343 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 AP001596.2-201ENST00000608410 312 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 RIOK3P1-201ENST00000418778 1528 ntBASIC4.25□□□□□ -1.73
CHMP4CQ96CF2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AL161912.2-201ENST00000565707 3007 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 Y_RNA.402-201ENST00000383972 102 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 Y_RNA.450-201ENST00000384198 113 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 SNORA24.1-201ENST00000384401 135 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 MIR218-2-201ENST00000385006 110 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 RNU6-817P-201ENST00000391083 104 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC114491.1-201ENST00000416095 246 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 USP9YP27-201ENST00000418455 438 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 BTF3L4P3-201ENST00000418879 476 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC002075.2-201ENST00000425207 252 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 CBWD4P-201ENST00000445695 655 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 RPS29P31-201ENST00000446147 164 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 RPL23AP62-201ENST00000463396 453 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC004801.2-202ENST00000463559 283 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 RN7SL293P-201ENST00000481765 281 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC110768.1-201ENST00000509222 400 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 RNA5SP291-201ENST00000517222 105 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 ATP5F1P5-201ENST00000526403 760 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC004024.1-201ENST00000549244 247 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AL157687.1-201ENST00000554853 619 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC174048.1-201ENST00000603389 144 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 U3.45-201ENST00000607547 219 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AL365204.3-201ENST00000612448 685 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC090132.2-201ENST00000615881 347 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 AC091152.2-201ENST00000591628 2569 ntBASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.24□□□□□ -1.73
CHMP4CQ96CF2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms