Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC021739.1-201ENST00000559631 174 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC008751.2-201ENST00000597885 980 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 AL356280.1-201ENST00000603614 379 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 SCARNA17.4-201ENST00000614296 143 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC012314.7-201ENST00000619693 93 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC007671.2-201ENST00000637344 619 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PTP4A1Q93096 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTP4A1Q93096 OR1S2-201ENST00000302592 978 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 RNU5F-7P-201ENST00000363696 115 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 RNA5SP267-201ENST00000364893 126 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 MIR34B-201ENST00000385076 84 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 AL139397.2-201ENST00000404529 772 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 RPS3AP25-201ENST00000411660 793 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 USP9YP6-201ENST00000413550 854 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 AL451062.2-201ENST00000427515 271 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC137499.1-201ENST00000427602 88 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC006028.1-201ENST00000438379 402 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC118469.1-201ENST00000442943 488 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 HMGN2P10-201ENST00000448085 265 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 NIPA2P5-201ENST00000452282 464 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 SSXP1-201ENST00000453640 473 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 GZMAP1-201ENST00000503054 631 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 RNU6-677P-201ENST00000516914 101 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 AP001372.4-201ENST00000524889 472 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC091489.2-201ENST00000566263 604 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 AL391813.1-201ENST00000603098 260 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC174048.1-201ENST00000603389 144 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC024220.1-201ENST00000603675 484 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 MTCYBP22-201ENST00000603788 447 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 AC034229.4-201ENST00000607861 441 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 AL589994.2-201ENST00000621124 579 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 MIR7157-201ENST00000635801 60 ntBASIC2.79□□□□□ -1.96
PTP4A1Q93096 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTP4A1Q93096 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.79□□□□□ -1.96
PTP4A1Q93096 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PTP4A1Q93096 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTP4A1Q93096 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC093010.3-201ENST00000570269 15214 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC004944.1-201ENST00000517807 3059 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 MTND4P35-201ENST00000604257 1375 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AL355596.1-201ENST00000565399 3996 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 NACAP2-201ENST00000318548 624 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 RNU6-500P-201ENST00000362349 107 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 RNU6-533P-201ENST00000384144 107 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 RNA5SP171-201ENST00000391071 115 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 MTND2P9-201ENST00000422293 931 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC019097.1-201ENST00000424783 735 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 RPS24P13-201ENST00000442520 397 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 GDI2P2-201ENST00000445131 608 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 MTND1P12-201ENST00000455231 147 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC091153.1-201ENST00000466297 402 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 RN7SL807P-201ENST00000470923 297 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC107626.1-201ENST00000471084 183 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC103975.1-201ENST00000482506 483 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 RN7SL20P-201ENST00000488827 297 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 RNU6-703P-201ENST00000516946 107 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 MIR3167-201ENST00000579623 85 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC090616.3-201ENST00000582184 217 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC006338.1-201ENST00000618453 749 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AC023510.2-201ENST00000622162 746 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 AL356266.1-201ENST00000623311 483 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 U6.99-201ENST00000637524 83 ntBASIC2.78□□□□□ -1.96
PTP4A1Q93096 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PTP4A1Q93096 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.78□□□□□ -1.96
PTP4A1Q93096 TEX21P-201ENST00000447107 1476 ntBASIC2.77□□□□□ -1.97
PTP4A1Q93096 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms