Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL590639.1-201ENST00000456484 337 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 RNU6-329P-201ENST00000459618 107 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC004801.2-202ENST00000463559 283 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC068587.1-201ENST00000483613 781 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 RPL7P47-201ENST00000497299 556 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 KLHL2P1-201ENST00000508691 521 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC002456.2-201ENST00000509356 380 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 TTC39CP1-201ENST00000512513 755 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 RNU7-30P-201ENST00000516835 62 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 IGKV2-23-201ENST00000518729 323 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 RANP3-201ENST00000530970 276 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC090877.1-201ENST00000561418 344 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC005951.2-201ENST00000576282 495 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 FAM60BP-201ENST00000578364 658 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC104763.2-201ENST00000604179 382 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 MIR6867-201ENST00000610636 67 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC093913.1-201ENST00000614178 329 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 ZYXP1-201ENST00000617638 118 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 CEP170P1-201ENST00000502249 4587 ntBASIC4.05□□□□□ -1.76
CCHCR1Q8TD31 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 SDAD1P2-201ENST00000441308 2028 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RLIMP1-201ENST00000339626 1680 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AL133383.2-201ENST00000622958 2336 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 Y_RNA.167-201ENST00000363735 109 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RNA5SP399-201ENST00000364003 117 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 SNORA32.2-201ENST00000384049 122 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AL592114.1-201ENST00000403842 483 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RPL21P65-201ENST00000406094 466 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RNU6-628P-201ENST00000410675 107 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AC008850.1-201ENST00000427546 362 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AC004975.1-201ENST00000428733 208 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 MRPL50P4-201ENST00000446432 475 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 snoU13.24-201ENST00000458998 104 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RNU7-170P-201ENST00000459303 61 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RPL21P11-201ENST00000461458 483 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RPL21P8-201ENST00000465083 535 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 SNRPGP3-201ENST00000469405 227 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 VN1R104P-201ENST00000505115 1009 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 MTCO3P9-201ENST00000506989 781 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RN7SKP209-201ENST00000516888 304 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RNU6-840P-201ENST00000517275 65 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RPL7P20-201ENST00000520308 745 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 MIR5583-1-201ENST00000580941 59 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 MIR4742-201ENST00000581069 85 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 BDH2P1-201ENST00000602288 736 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AL353621.2-201ENST00000605340 133 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 uc_338.5-201ENST00000611839 155 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AC121333.1-201ENST00000567488 2709 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 AL157700.1-201ENST00000561973 1432 ntBASIC4.04□□□□□ -1.76
CCHCR1Q8TD31 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 RNU6-82P-201ENST00000363970 107 ntBASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 RNU1-13P-201ENST00000384499 162 ntBASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 AL122016.1-201ENST00000403365 367 ntBASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 EI24P1-201ENST00000416584 867 ntBASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 AL691449.1-201ENST00000426570 421 ntBASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 RNU6-1208P-201ENST00000459588 107 ntBASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 AC010285.1-201ENST00000470580 392 ntBASIC4.03□□□□□ -1.76
CCHCR1Q8TD31 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms