Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 KLF3P2-201ENST00000465138 268 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 RN7SL601P-201ENST00000471221 293 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AL358832.1-201ENST00000497800 389 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB1Q86U70 KCTD9P5-201ENST00000504141 1170 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.12□□□□□ -1.91
LDB1Q86U70 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB1Q86U70 RNU6-711P-201ENST00000517255 106 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB1Q86U70 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB1Q86U70 AMZ2P1-203ENST00000565833 850 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AC012213.3-201ENST00000577199 777 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 MIR3913-1-201ENST00000577744 102 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.12□□□□□ -1.91
LDB1Q86U70 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AP002360.4-201ENST00000606980 481 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LDB1Q86U70 AL589994.2-201ENST00000621124 579 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AC007998.5-201ENST00000622938 237 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AC092656.1-203ENST00000624134 423 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LDB1Q86U70 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB1Q86U70 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.12□□□□□ -1.91
LDB1Q86U70 MTND5P1-201ENST00000445440 1375 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LDB1Q86U70 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
LDB1Q86U70 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LDB1Q86U70 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.11□□□□□ -1.91
LDB1Q86U70 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 SMIM11P1-201ENST00000369586 178 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LDB1Q86U70 RNU6-1119P-201ENST00000384349 108 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 SNORD67-201ENST00000390833 111 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 DEFB108C-201ENST00000400154 252 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 RNA5SP120-201ENST00000410900 112 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 AC016907.1-201ENST00000419483 435 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 AL158156.1-201ENST00000422509 473 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 RPL31P35-201ENST00000431058 377 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 AL353705.1-201ENST00000433468 480 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
LDB1Q86U70 AC110794.1-201ENST00000505816 425 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 MTND4LP22-201ENST00000508209 276 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 MTCO3P28-201ENST00000513351 515 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 HMGB1P41-201ENST00000520234 440 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LDB1Q86U70 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.11□□□□□ -1.91
LDB1Q86U70 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB1Q86U70 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB1Q86U70 MIR5680-201ENST00000577577 84 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 GLUD1P4-201ENST00000590914 418 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 AC007619.2-201ENST00000605743 379 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 AC008498.1-201ENST00000613012 531 ntBASIC3.11□□□□□ -1.91
LDB1Q86U70 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB1Q86U70 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB1Q86U70 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.1□□□□□ -1.91
LDB1Q86U70 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LDB1Q86U70 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LDB1Q86U70 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LDB1Q86U70 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LDB1Q86U70 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LDB1Q86U70 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LDB1Q86U70 MIR208A-201ENST00000362287 71 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 RNU6-1167P-201ENST00000363227 94 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 RNU4-24P-201ENST00000364565 139 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 RNU6-169P-201ENST00000365336 107 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 RNU6-39P-201ENST00000384344 107 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 RNU6-1035P-201ENST00000384477 107 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 RNU6-14P-201ENST00000384630 106 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 U3.19-201ENST00000390893 196 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AL139397.2-201ENST00000404529 772 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB1Q86U70 PIGFP2-201ENST00000421400 651 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AC104651.1-201ENST00000427559 735 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB1Q86U70 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.1□□□□□ -1.91
LDB1Q86U70 RPS12P18-201ENST00000442381 270 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB1Q86U70 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.1□□□□□ -1.91
LDB1Q86U70 RNU6-953P-201ENST00000459154 107 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 RPS27P29-201ENST00000463110 252 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.1□□□□□ -1.91
LDB1Q86U70 MTND3P5-201ENST00000512798 333 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.1□□□□□ -1.91
LDB1Q86U70 RN7SKP298-201ENST00000515950 94 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 RNA5SP290-201ENST00000517133 127 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 MTCO2P4-201ENST00000517968 247 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB1Q86U70 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB1Q86U70 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.1□□□□□ -1.91
LDB1Q86U70 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.1□□□□□ -1.91
LDB1Q86U70 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.1□□□□□ -1.91
LDB1Q86U70 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.1□□□□□ -1.91
LDB1Q86U70 MTCYBP33-201ENST00000575007 1130 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AC005951.1-201ENST00000576706 485 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB1Q86U70 AC104763.2-201ENST00000604179 382 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms