Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MIR2355-201ENST00000517199 87 ntBASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 FKBP1BP1-201ENST00000553366 325 ntBASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 MIR4659A-201ENST00000580269 81 ntBASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 BDH2P1-201ENST00000602288 736 ntBASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 AL161756.2-201ENST00000604597 246 ntBASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 uc_338.7-201ENST00000621834 124 ntBASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 AL031601.2-202ENST00000622650 282 ntBASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 AC008873.1-201ENST00000625051 138 ntBASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 AC025031.4-201ENST00000621248 3271 ntBASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RSPO4Q2I0M5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 RAD17P1-201ENST00000418130 2042 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 RNU6-371P-201ENST00000364283 108 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 Y_RNA.286-201ENST00000364813 102 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 RNU6-514P-201ENST00000384208 107 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 SNORA70.10-201ENST00000384515 134 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 RNU6-754P-201ENST00000391166 107 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AL590704.1-201ENST00000402856 794 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 SNORA77-201ENST00000408716 125 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 CRYBB2P1-203ENST00000415709 538 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 OOSP1P1-201ENST00000423265 274 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AL160275.3-201ENST00000423876 471 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 GAPDHP27-201ENST00000447427 1020 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AC006511.1-201ENST00000470614 315 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AP001025.1-201ENST00000486139 332 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AL590705.4-201ENST00000532209 134 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AC108738.1-201ENST00000603703 237 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AC091979.2-201ENST00000607514 214 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AC011476.5-201ENST00000615594 130 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AC019206.1-201ENST00000621938 425 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 AC039056.2-201ENST00000622261 511 ntBASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RSPO4Q2I0M5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 RNU6-270P-201ENST00000364131 105 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 SNORD82-201ENST00000365530 70 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 MIR539-201ENST00000365690 78 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 RNU1-13P-201ENST00000384499 162 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 U3.30-201ENST00000391308 210 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 PTMAP2-201ENST00000397627 327 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 RNU2-15P-201ENST00000410692 191 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 TMSB10P2-201ENST00000416049 131 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 BX276092.6-201ENST00000430476 250 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 NOP56P2-201ENST00000447491 769 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 BX276092.8-201ENST00000455722 250 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 RNU6-1211P-201ENST00000459179 105 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 RNU7-87P-201ENST00000459343 62 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 RPL21P41-201ENST00000459863 264 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 AC005840.1-201ENST00000498412 377 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 CASP1P1-201ENST00000526345 212 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 AC127455.1-201ENST00000565496 145 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 AC006329.2-201ENST00000611491 394 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 TUG1_4.1-201ENST00000619464 181 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms