Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AL590383.1-201ENST00000428602 75 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.18□□□□□ -1.9
EFNB3Q15768 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.18□□□□□ -1.9
EFNB3Q15768 AL358232.1-201ENST00000448030 501 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.18□□□□□ -1.9
EFNB3Q15768 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.18□□□□□ -1.9
EFNB3Q15768 AC087588.1-201ENST00000462203 316 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 RPS29P25-201ENST00000481709 171 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.18□□□□□ -1.9
EFNB3Q15768 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
EFNB3Q15768 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.18□□□□□ -1.9
EFNB3Q15768 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 SNORD60.2-201ENST00000516883 86 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 RN7SKP60-201ENST00000516985 239 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.18□□□□□ -1.9
EFNB3Q15768 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
EFNB3Q15768 AC103843.2-201ENST00000530523 682 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 AC118273.2-201ENST00000532092 465 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.18□□□□□ -1.9
EFNB3Q15768 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.18□□□□□ -1.9
EFNB3Q15768 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.18□□□□□ -1.9
EFNB3Q15768 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.18□□□□□ -1.9
EFNB3Q15768 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.18□□□□□ -1.9
EFNB3Q15768 MIR4703-201ENST00000577728 79 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.18□□□□□ -1.9
EFNB3Q15768 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.18□□□□□ -1.9
EFNB3Q15768 BNIP3P30-201ENST00000601184 574 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 DPPA3P3-201ENST00000603842 430 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.18□□□□□ -1.9
EFNB3Q15768 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
EFNB3Q15768 AL020991.1-201ENST00000612314 373 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 AC024940.5-201ENST00000622889 474 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 AC011155.2-201ENST00000623202 216 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 AC099654.14-201ENST00000638599 341 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EFNB3Q15768 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EFNB3Q15768 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EFNB3Q15768 AC008568.2-201ENST00000623862 2313 ntBASIC3.18□□□□□ -1.9
EFNB3Q15768 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EFNB3Q15768 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EFNB3Q15768 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.17□□□□□ -1.9
EFNB3Q15768 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.17□□□□□ -1.9
EFNB3Q15768 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.17□□□□□ -1.9
EFNB3Q15768 RNA5SP119-201ENST00000362715 117 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 RNU6-451P-201ENST00000362921 107 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 RNA5SP51-201ENST00000364750 119 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
EFNB3Q15768 HMGN2P8-201ENST00000391458 268 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AL354719.1-201ENST00000406535 843 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 RNA5SP118-201ENST00000410385 109 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AL109913.1-201ENST00000421173 514 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.17□□□□□ -1.9
EFNB3Q15768 ATP5JP1-201ENST00000431631 322 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.17□□□□□ -1.9
EFNB3Q15768 HMGB1P31-201ENST00000437242 427 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 MTATP6P23-201ENST00000440153 476 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.17□□□□□ -1.9
EFNB3Q15768 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.17□□□□□ -1.9
EFNB3Q15768 RN7SL93P-201ENST00000463035 293 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AC106707.2-201ENST00000484182 374 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AC098591.2-201ENST00000510152 315 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 RNA5SP401-201ENST00000515920 127 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 RN7SKP219-201ENST00000516825 296 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 RN7SKP289-201ENST00000517244 295 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 RANP9-201ENST00000519957 271 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 ATP5F1P5-201ENST00000526403 760 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 RANP3-201ENST00000530970 276 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.17□□□□□ -1.9
EFNB3Q15768 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.17□□□□□ -1.9
EFNB3Q15768 AP005205.1-201ENST00000563503 508 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AP001029.3-201ENST00000588063 596 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AC002545.1-201ENST00000592511 181 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.17□□□□□ -1.9
EFNB3Q15768 AC012409.4-201ENST00000612923 249 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EFNB3Q15768 AC079684.1-201ENST00000621405 437 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 MTND5P42-201ENST00000637720 498 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AP000553.6-201ENST00000641242 118 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 AC009093.8-201ENST00000641769 292 ntBASIC3.17□□□□□ -1.9
EFNB3Q15768 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
EFNB3Q15768 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
EFNB3Q15768 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
EFNB3Q15768 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
EFNB3Q15768 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
EFNB3Q15768 HSPA8P1-201ENST00000425843 1833 ntBASIC3.16□□□□□ -1.9
EFNB3Q15768 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EFNB3Q15768 AL136164.4-201ENST00000625013 2135 ntBASIC3.16□□□□□ -1.9
EFNB3Q15768 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EFNB3Q15768 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EFNB3Q15768 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
EFNB3Q15768 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
EFNB3Q15768 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EFNB3Q15768 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
EFNB3Q15768 SNORA71.3-201ENST00000362582 128 ntBASIC3.16□□□□□ -1.9
EFNB3Q15768 Y_RNA.88-201ENST00000363029 99 ntBASIC3.16□□□□□ -1.9
EFNB3Q15768 RNU1-18P-201ENST00000363062 164 ntBASIC3.16□□□□□ -1.9
EFNB3Q15768 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
EFNB3Q15768 RNU6-14P-201ENST00000384630 106 ntBASIC3.16□□□□□ -1.9
EFNB3Q15768 Y_RNA.576-201ENST00000384781 102 ntBASIC3.16□□□□□ -1.9
EFNB3Q15768 MIR7-3-201ENST00000384898 110 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms