Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.98□□□□□ -1.61
USP11P51784 AL137100.2-201ENST00000555786 315 ntBASIC4.98□□□□□ -1.61
USP11P51784 AL160290.3-201ENST00000604869 165 ntBASIC4.98□□□□□ -1.61
USP11P51784 AL359547.2-201ENST00000615810 418 ntBASIC4.98□□□□□ -1.61
USP11P51784 AL161637.1-201ENST00000622380 412 ntBASIC4.98□□□□□ -1.61
USP11P51784 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USP11P51784 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.98□□□□□ -1.61
USP11P51784 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
USP11P51784 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.98□□□□□ -1.61
USP11P51784 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP11P51784 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.98□□□□□ -1.61
USP11P51784 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP11P51784 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP11P51784 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.97□□□□□ -1.61
USP11P51784 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP11P51784 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP11P51784 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP11P51784 AC138393.1-203ENST00000327086 343 ntBASIC4.97□□□□□ -1.61
USP11P51784 Y_RNA.276-201ENST00000364732 109 ntBASIC4.97□□□□□ -1.61
USP11P51784 RNA5SP22-201ENST00000365393 109 ntBASIC4.97□□□□□ -1.61
USP11P51784 RNU6-637P-201ENST00000384050 107 ntBASIC4.97□□□□□ -1.61
USP11P51784 RNU6-701P-201ENST00000384059 107 ntBASIC4.97□□□□□ -1.61
USP11P51784 SNORD51-201ENST00000384320 80 ntBASIC4.97□□□□□ -1.61
USP11P51784 SNORA19-201ENST00000384737 128 ntBASIC4.97□□□□□ -1.61
USP11P51784 AC110754.1-201ENST00000399740 601 ntBASIC4.97□□□□□ -1.61
USP11P51784 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.97□□□□□ -1.61
USP11P51784 MTND5P15-201ENST00000434246 349 ntBASIC4.97□□□□□ -1.61
USP11P51784 CEACAMP1-201ENST00000434624 1035 ntBASIC4.97□□□□□ -1.61
USP11P51784 FABP5P13-201ENST00000452144 328 ntBASIC4.97□□□□□ -1.61
USP11P51784 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.97□□□□□ -1.61
USP11P51784 AC084198.1-201ENST00000477747 402 ntBASIC4.97□□□□□ -1.61
USP11P51784 AC012158.1-204ENST00000483430 465 ntBASIC4.97□□□□□ -1.61
USP11P51784 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.97□□□□□ -1.61
USP11P51784 Y_RNA.673-201ENST00000516306 88 ntBASIC4.97□□□□□ -1.61
USP11P51784 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.97□□□□□ -1.61
USP11P51784 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP11P51784 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.97□□□□□ -1.61
USP11P51784 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
USP11P51784 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.97□□□□□ -1.61
USP11P51784 AL670379.6-201ENST00000603753 252 ntBASIC4.97□□□□□ -1.61
USP11P51784 AL670379.1-201ENST00000604752 252 ntBASIC4.97□□□□□ -1.61
USP11P51784 AL670379.5-201ENST00000605253 252 ntBASIC4.97□□□□□ -1.61
USP11P51784 AL670379.8-201ENST00000605353 252 ntBASIC4.97□□□□□ -1.61
USP11P51784 AL158032.1-201ENST00000605401 106 ntBASIC4.97□□□□□ -1.61
USP11P51784 AL670379.7-201ENST00000605823 252 ntBASIC4.97□□□□□ -1.61
USP11P51784 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
USP11P51784 AL021997.2-201ENST00000615674 271 ntBASIC4.97□□□□□ -1.61
USP11P51784 SNHG22-203ENST00000617833 660 ntBASIC4.97□□□□□ -1.61
USP11P51784 AC009951.1-201ENST00000623674 2614 ntBASIC4.97□□□□□ -1.61
USP11P51784 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP11P51784 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP11P51784 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP11P51784 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP11P51784 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.61
USP11P51784 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.96□□□□□ -1.61
USP11P51784 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
USP11P51784 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.96□□□□□ -1.61
USP11P51784 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
USP11P51784 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
USP11P51784 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
USP11P51784 AC090971.4-201ENST00000560291 1800 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC126755.2-208ENST00000327792 462 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC138969.1-213ENST00000331436 462 ntBASIC4.96□□□□□ -1.62
USP11P51784 Y_RNA.151-201ENST00000363566 112 ntBASIC4.96□□□□□ -1.62
USP11P51784 RNU6-770P-201ENST00000363929 105 ntBASIC4.96□□□□□ -1.62
USP11P51784 RNU6-1093P-201ENST00000391194 107 ntBASIC4.96□□□□□ -1.62
USP11P51784 RNA5SP111-201ENST00000411386 101 ntBASIC4.96□□□□□ -1.62
USP11P51784 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.96□□□□□ -1.62
USP11P51784 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.96□□□□□ -1.62
USP11P51784 AL590135.1-201ENST00000422215 156 ntBASIC4.96□□□□□ -1.62
USP11P51784 AL645568.3-201ENST00000433683 316 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC010655.1-201ENST00000449336 292 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC083829.1-201ENST00000503756 657 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.96□□□□□ -1.62
USP11P51784 AC093840.1-201ENST00000511599 336 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.96□□□□□ -1.62
USP11P51784 SNORA40.14-201ENST00000516543 86 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.96□□□□□ -1.62
USP11P51784 HSPE1P20-201ENST00000538133 289 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC022080.3-201ENST00000544433 482 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.96□□□□□ -1.62
USP11P51784 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.96□□□□□ -1.62
USP11P51784 MIR4716-201ENST00000579628 84 ntBASIC4.96□□□□□ -1.62
USP11P51784 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.96□□□□□ -1.62
USP11P51784 RAC1P9-201ENST00000604990 392 ntBASIC4.96□□□□□ -1.62
USP11P51784 AC083809.1-201ENST00000615051 472 ntBASIC4.96□□□□□ -1.62
USP11P51784 MIR6758-201ENST00000620653 63 ntBASIC4.96□□□□□ -1.62
USP11P51784 AL512643.1-201ENST00000635735 524 ntBASIC4.96□□□□□ -1.62
USP11P51784 NOL8P1-201ENST00000508336 3529 ntBASIC4.96□□□□□ -1.62
USP11P51784 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.96□□□□□ -1.62
USP11P51784 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP11P51784 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP11P51784 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
USP11P51784 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
USP11P51784 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.95□□□□□ -1.62
USP11P51784 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.95□□□□□ -1.62
USP11P51784 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP11P51784 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP11P51784 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.95□□□□□ -1.62
USP11P51784 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms