Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC068538.1-201ENST00000376856 336 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-1P43699 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.88□□□□□ -1.95
NKX2-1P43699 RNU6-217P-201ENST00000384164 104 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 RNU6-1035P-201ENST00000384477 107 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 RNU1-13P-201ENST00000384499 162 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 MIR454-201ENST00000390180 115 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 RNU6-387P-201ENST00000411331 105 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-1P43699 OR51A5P-201ENST00000415429 942 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 RPL23AP82-202ENST00000427528 469 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 MTATP6P30-201ENST00000443540 664 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 RNU6-953P-201ENST00000459154 107 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 RPL37P6-201ENST00000460682 294 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 CENPBD1P1-201ENST00000464061 469 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 RN7SL385P-201ENST00000468873 276 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.88□□□□□ -1.95
NKX2-1P43699 AC083798.1-201ENST00000472671 131 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 AL135752.1-201ENST00000479477 471 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 VN1R105P-201ENST00000486595 910 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 RPL36AP51-201ENST00000487216 318 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX2-1P43699 MIR2276-201ENST00000516886 89 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 AC093331.1-201ENST00000521474 169 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.88□□□□□ -1.95
NKX2-1P43699 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.88□□□□□ -1.95
NKX2-1P43699 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.88□□□□□ -1.95
NKX2-1P43699 AC067852.3-201ENST00000589177 561 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX2-1P43699 AL606490.9-201ENST00000603331 271 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 AC104763.2-201ENST00000604179 382 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 AP001596.2-201ENST00000608410 312 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 AL365204.3-201ENST00000612448 685 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 AP003355.3-201ENST00000623465 114 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX2-1P43699 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX2-1P43699 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NKX2-1P43699 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX2-1P43699 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-1P43699 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-1P43699 GABRG2-229ENST00000641017 3628 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 AC004972.1-201ENST00000623934 2209 ntBASIC2.88□□□□□ -1.95
NKX2-1P43699 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-1P43699 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.87□□□□□ -1.95
NKX2-1P43699 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-1P43699 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-1P43699 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-1P43699 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-1P43699 RNU4-48P-201ENST00000365559 182 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 Y_RNA.554-201ENST00000384672 102 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 SNORA48.8-201ENST00000391324 134 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-1P43699 RNA5SP293-201ENST00000410527 113 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 RNU2-39P-201ENST00000410604 198 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 RNU6-628P-201ENST00000410675 107 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
NKX2-1P43699 AC012498.1-201ENST00000424037 437 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.87□□□□□ -1.95
NKX2-1P43699 RSL24D1P6-201ENST00000426934 401 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AL117339.2-201ENST00000430475 180 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.87□□□□□ -1.95
NKX2-1P43699 NEFMP1-201ENST00000443423 1006 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-1P43699 SNRPGP6-201ENST00000451124 220 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.87□□□□□ -1.95
NKX2-1P43699 AC092798.1-201ENST00000458542 409 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-1P43699 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-1P43699 RNU6-314P-201ENST00000516574 104 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 RNU6-1220P-201ENST00000517126 108 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
NKX2-1P43699 IGHV3-76-201ENST00000522465 295 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-1P43699 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.87□□□□□ -1.95
NKX2-1P43699 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.87□□□□□ -1.95
NKX2-1P43699 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.87□□□□□ -1.95
NKX2-1P43699 SUB1P2-201ENST00000556401 297 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.87□□□□□ -1.95
NKX2-1P43699 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-1P43699 AC024619.4-201ENST00000580924 316 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AC006504.3-201ENST00000586818 523 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AC119501.1-201ENST00000603646 475 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AC025449.1-201ENST00000603896 529 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AC010591.1-201ENST00000603941 649 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 SNORA51-201ENST00000606420 132 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-1P43699 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
NKX2-1P43699 AC068831.8-201ENST00000620171 435 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.87□□□□□ -1.95
NKX2-1P43699 AL160394.1-201ENST00000624765 724 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AL157786.1-207ENST00000627771 695 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 AC093010.3-201ENST00000570269 15214 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.87□□□□□ -1.95
NKX2-1P43699 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-1P43699 MAPK10-322ENST00000641485 4530 ntBASIC2.87□□□□□ -1.95
NKX2-1P43699 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-1P43699 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-1P43699 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms