Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AP001148.1-201ENST00000624124 2359 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AF117829.1-206ENST00000621883 3802 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBEC1P41238 CUL1P1-201ENST00000509510 2425 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBEC1P41238 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
APOBEC1P41238 Y_RNA.9-201ENST00000362354 101 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 SNORA62.1-201ENST00000364287 154 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 RNU6-1322P-201ENST00000364309 107 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
APOBEC1P41238 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBEC1P41238 SNORA24.1-201ENST00000384401 135 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 RNU6-14P-201ENST00000384630 106 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 Y_RNA.554-201ENST00000384672 102 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBEC1P41238 RNU6-387P-201ENST00000411331 105 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBEC1P41238 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.11□□□□□ -1.91
APOBEC1P41238 Z85995.1-201ENST00000415547 335 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 MRPL50P2-201ENST00000416821 482 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 BTF3L4P3-201ENST00000418879 476 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBEC1P41238 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBEC1P41238 AL159169.1-201ENST00000421119 127 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBEC1P41238 MTCO3P30-201ENST00000426425 670 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBEC1P41238 GOT2P5-201ENST00000433995 546 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 MTATP6P13-201ENST00000438531 667 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 MTND4P25-201ENST00000441039 533 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBEC1P41238 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBEC1P41238 PRDX3P3-201ENST00000447765 522 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBEC1P41238 MRPS31P2-201ENST00000451581 518 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 FABP5P13-201ENST00000452144 328 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AL356010.1-201ENST00000456364 102 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 MRPS17P3-201ENST00000465453 385 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AC006512.1-201ENST00000468816 291 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AC078785.3-201ENST00000476607 425 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AL160314.1-201ENST00000490836 438 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 RPL7P47-201ENST00000497299 556 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 ARL4AP2-201ENST00000507378 601 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBEC1P41238 TTC39CP1-201ENST00000512513 755 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 Y_RNA.693-201ENST00000516641 110 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBEC1P41238 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBEC1P41238 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.11□□□□□ -1.91
APOBEC1P41238 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBEC1P41238 OR5B19P-201ENST00000531766 928 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 OR5AL2P-201ENST00000532185 920 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 OR5BN1P-201ENST00000532955 829 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBEC1P41238 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.11□□□□□ -1.91
APOBEC1P41238 AL512360.1-201ENST00000555346 234 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBEC1P41238 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBEC1P41238 AC024619.4-201ENST00000580924 316 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
APOBEC1P41238 AC025165.5-201ENST00000602802 578 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.11□□□□□ -1.91
APOBEC1P41238 U3.45-201ENST00000607547 219 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.11□□□□□ -1.91
APOBEC1P41238 AC090517.2-201ENST00000614966 680 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 AC058791.1-201ENST00000608412 3198 ntBASIC3.11□□□□□ -1.91
APOBEC1P41238 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
APOBEC1P41238 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
APOBEC1P41238 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
APOBEC1P41238 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
APOBEC1P41238 ZNF807-201ENST00000328088 1707 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC1P41238 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC1P41238 API5P2-201ENST00000397055 1498 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBEC1P41238 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC1P41238 RNU6-190P-201ENST00000384154 102 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 AP000567.1-201ENST00000406413 156 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 FAT1P1-201ENST00000406588 507 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 MIR548F1-201ENST00000408667 84 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC1P41238 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC1P41238 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC017079.2-201ENST00000416102 485 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBEC1P41238 USP9YP18-201ENST00000425912 695 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC007919.1-201ENST00000429380 217 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 AC091286.1-201ENST00000431233 461 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 USP9YP28-201ENST00000435142 589 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 UBE2V1P8-201ENST00000437166 265 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 RPL7P54-201ENST00000438336 674 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC1P41238 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBEC1P41238 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC008264.1-201ENST00000447612 367 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 HMGB3P8-201ENST00000449709 577 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms