Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RPL21P7-201ENST00000557463 483 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.27□□□□□ -1.73
ATF4P18848 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.27□□□□□ -1.73
ATF4P18848 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.27□□□□□ -1.73
ATF4P18848 AC024153.1-201ENST00000603103 365 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AC040896.1-201ENST00000613819 479 ntBASIC4.27□□□□□ -1.73
ATF4P18848 uc_338.32-201ENST00000615087 172 ntBASIC4.27□□□□□ -1.73
ATF4P18848 MIR6134-201ENST00000617606 109 ntBASIC4.27□□□□□ -1.73
ATF4P18848 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.27□□□□□ -1.73
ATF4P18848 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ATF4P18848 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
ATF4P18848 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATF4P18848 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATF4P18848 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATF4P18848 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATF4P18848 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATF4P18848 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ATF4P18848 RNA5SP46-201ENST00000362370 120 ntBASIC4.26□□□□□ -1.73
ATF4P18848 RNU6-1115P-201ENST00000362490 106 ntBASIC4.26□□□□□ -1.73
ATF4P18848 RNA5SP295-201ENST00000362655 121 ntBASIC4.26□□□□□ -1.73
ATF4P18848 RNU6-428P-201ENST00000362942 107 ntBASIC4.26□□□□□ -1.73
ATF4P18848 Y_RNA.216-201ENST00000364205 93 ntBASIC4.26□□□□□ -1.73
ATF4P18848 U8.8-201ENST00000365399 135 ntBASIC4.26□□□□□ -1.73
ATF4P18848 SNORA33.2-201ENST00000365413 134 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AC117470.1-201ENST00000381974 330 ntBASIC4.26□□□□□ -1.73
ATF4P18848 SNORA22B-201ENST00000383876 138 ntBASIC4.26□□□□□ -1.73
ATF4P18848 MIR518D-201ENST00000385014 87 ntBASIC4.26□□□□□ -1.73
ATF4P18848 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ATF4P18848 RN7SKP229-201ENST00000410465 302 ntBASIC4.26□□□□□ -1.73
ATF4P18848 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.26□□□□□ -1.73
ATF4P18848 RAC1P3-201ENST00000416129 580 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.26□□□□□ -1.73
ATF4P18848 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.26□□□□□ -1.73
ATF4P18848 AC079355.1-201ENST00000421770 223 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.26□□□□□ -1.73
ATF4P18848 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.26□□□□□ -1.73
ATF4P18848 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.26□□□□□ -1.73
ATF4P18848 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATF4P18848 NIPA2P5-201ENST00000452282 464 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.26□□□□□ -1.73
ATF4P18848 RN7SL817P-201ENST00000480777 288 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AC068781.1-201ENST00000488231 618 ntBASIC4.26□□□□□ -1.73
ATF4P18848 Y_RNA.661-201ENST00000516003 99 ntBASIC4.26□□□□□ -1.73
ATF4P18848 RNU6-327P-201ENST00000516270 127 ntBASIC4.26□□□□□ -1.73
ATF4P18848 SNORA43.2-201ENST00000516652 128 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.26□□□□□ -1.73
ATF4P18848 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.26□□□□□ -1.73
ATF4P18848 IGLV3-30-201ENST00000524362 298 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.26□□□□□ -1.73
ATF4P18848 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.26□□□□□ -1.73
ATF4P18848 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATF4P18848 AL451007.1-201ENST00000595491 289 ntBASIC4.26□□□□□ -1.73
ATF4P18848 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATF4P18848 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.26□□□□□ -1.73
ATF4P18848 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.26□□□□□ -1.73
ATF4P18848 SRGNP1-201ENST00000603392 451 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AC091979.2-201ENST00000607514 214 ntBASIC4.26□□□□□ -1.73
ATF4P18848 MIR8076-201ENST00000611401 83 ntBASIC4.26□□□□□ -1.73
ATF4P18848 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ATF4P18848 AC006111.3-201ENST00000622137 383 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AL691477.1-201ENST00000624398 162 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AL049767.1-202ENST00000637826 242 ntBASIC4.26□□□□□ -1.73
ATF4P18848 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATF4P18848 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATF4P18848 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
ATF4P18848 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.26□□□□□ -1.73
ATF4P18848 AC110491.1-201ENST00000562191 2010 ntBASIC4.26□□□□□ -1.73
ATF4P18848 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.26□□□□□ -1.73
ATF4P18848 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.26□□□□□ -1.73
ATF4P18848 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATF4P18848 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
ATF4P18848 Y_RNA.31-201ENST00000362574 102 ntBASIC4.25□□□□□ -1.73
ATF4P18848 RN7SKP227-201ENST00000364445 330 ntBASIC4.25□□□□□ -1.73
ATF4P18848 RNA5SP500-201ENST00000364486 119 ntBASIC4.25□□□□□ -1.73
ATF4P18848 RNA5SP30-201ENST00000365552 115 ntBASIC4.25□□□□□ -1.73
ATF4P18848 RNU6-639P-201ENST00000384074 107 ntBASIC4.25□□□□□ -1.73
ATF4P18848 Y_RNA.463-201ENST00000384271 102 ntBASIC4.25□□□□□ -1.73
ATF4P18848 MIR195-201ENST00000385194 87 ntBASIC4.25□□□□□ -1.73
ATF4P18848 RNU6-308P-201ENST00000390957 107 ntBASIC4.25□□□□□ -1.73
ATF4P18848 AL591034.2-201ENST00000402839 359 ntBASIC4.25□□□□□ -1.73
ATF4P18848 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.25□□□□□ -1.73
ATF4P18848 AL591043.1-201ENST00000432461 424 ntBASIC4.25□□□□□ -1.73
ATF4P18848 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.25□□□□□ -1.73
ATF4P18848 AC011816.1-201ENST00000441346 546 ntBASIC4.25□□□□□ -1.73
ATF4P18848 Z80107.2-201ENST00000445127 392 ntBASIC4.25□□□□□ -1.73
ATF4P18848 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.25□□□□□ -1.73
ATF4P18848 ADAM3A-203ENST00000461344 2157 ntBASIC4.25□□□□□ -1.73
ATF4P18848 RPL23AP14-201ENST00000468281 468 ntBASIC4.25□□□□□ -1.73
ATF4P18848 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.25□□□□□ -1.73
ATF4P18848 RNU6-1045P-201ENST00000516321 107 ntBASIC4.25□□□□□ -1.73
ATF4P18848 RNU6-612P-201ENST00000516909 102 ntBASIC4.25□□□□□ -1.73
ATF4P18848 AC007991.1-201ENST00000522680 631 ntBASIC4.25□□□□□ -1.73
ATF4P18848 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.25□□□□□ -1.73
ATF4P18848 OR8R1P-201ENST00000543943 764 ntBASIC4.25□□□□□ -1.73
ATF4P18848 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.25□□□□□ -1.73
ATF4P18848 AL391261.3-201ENST00000557194 520 ntBASIC4.25□□□□□ -1.73
ATF4P18848 VN1R107P-201ENST00000601784 209 ntBASIC4.25□□□□□ -1.73
ATF4P18848 AL360085.1-201ENST00000604713 532 ntBASIC4.25□□□□□ -1.73
ATF4P18848 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.25□□□□□ -1.73
ATF4P18848 AC012531.5-201ENST00000611375 151 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms