Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD44P16070 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD44P16070 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.47□□□□□ -1.37
CD44P16070 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD44P16070 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD44P16070 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
CD44P16070 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD44P16070 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CD44P16070 RNU6-882P-201ENST00000391025 103 ntBASIC6.47□□□□□ -1.37
CD44P16070 Y_RNA.587-201ENST00000391210 103 ntBASIC6.47□□□□□ -1.37
CD44P16070 RNA5SP56-201ENST00000410277 118 ntBASIC6.47□□□□□ -1.37
CD44P16070 RNU2-55P-201ENST00000411146 174 ntBASIC6.47□□□□□ -1.37
CD44P16070 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.47□□□□□ -1.37
CD44P16070 AL691449.1-201ENST00000426570 421 ntBASIC6.47□□□□□ -1.37
CD44P16070 MTND6P12-201ENST00000428247 522 ntBASIC6.47□□□□□ -1.37
CD44P16070 AC018797.1-201ENST00000510791 255 ntBASIC6.47□□□□□ -1.37
CD44P16070 RFPL4AP5-201ENST00000514977 504 ntBASIC6.47□□□□□ -1.37
CD44P16070 RNU6-365P-201ENST00000517113 106 ntBASIC6.47□□□□□ -1.37
CD44P16070 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.47□□□□□ -1.37
CD44P16070 MED28P6-201ENST00000558776 231 ntBASIC6.47□□□□□ -1.37
CD44P16070 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.47□□□□□ -1.37
CD44P16070 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CD44P16070 FAM27E2-201ENST00000619668 403 ntBASIC6.47□□□□□ -1.37
CD44P16070 BMS1P21-201ENST00000634565 365 ntBASIC6.47□□□□□ -1.37
CD44P16070 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD44P16070 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD44P16070 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.47□□□□□ -1.37
CD44P16070 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD44P16070 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CD44P16070 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD44P16070 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
CD44P16070 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.46□□□□□ -1.37
CD44P16070 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CD44P16070 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CD44P16070 AC232271.1-201ENST00000602455 2715 ntBASIC6.46□□□□□ -1.38
CD44P16070 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD44P16070 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CD44P16070 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.46□□□□□ -1.38
CD44P16070 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.46□□□□□ -1.38
CD44P16070 PNKDP1-201ENST00000435914 430 ntBASIC6.46□□□□□ -1.38
CD44P16070 MTATP6P21-201ENST00000440681 189 ntBASIC6.46□□□□□ -1.38
CD44P16070 RN7SL254P-201ENST00000460609 284 ntBASIC6.46□□□□□ -1.38
CD44P16070 AC068339.1-201ENST00000526965 141 ntBASIC6.46□□□□□ -1.38
CD44P16070 AC107016.1-201ENST00000550463 337 ntBASIC6.46□□□□□ -1.38
CD44P16070 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CD44P16070 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.46□□□□□ -1.38
CD44P16070 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC6.46□□□□□ -1.38
CD44P16070 U4atac.1-201ENST00000618345 95 ntBASIC6.46□□□□□ -1.38
CD44P16070 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.46□□□□□ -1.38
CD44P16070 AP004607.3-201ENST00000530354 3915 ntBASIC6.46□□□□□ -1.38
CD44P16070 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.46□□□□□ -1.38
CD44P16070 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD44P16070 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD44P16070 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD44P16070 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
CD44P16070 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CD44P16070 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.45□□□□□ -1.38
CD44P16070 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CD44P16070 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 Y_RNA.290-201ENST00000364879 114 ntBASIC6.45□□□□□ -1.38
CD44P16070 Y_RNA.362-201ENST00000365518 110 ntBASIC6.45□□□□□ -1.38
CD44P16070 NDUFB4P6-201ENST00000436819 366 ntBASIC6.45□□□□□ -1.38
CD44P16070 AC023141.8-201ENST00000442554 208 ntBASIC6.45□□□□□ -1.38
CD44P16070 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 AC016632.1-201ENST00000503994 196 ntBASIC6.45□□□□□ -1.38
CD44P16070 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.45□□□□□ -1.38
CD44P16070 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.45□□□□□ -1.38
CD44P16070 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.45□□□□□ -1.38
CD44P16070 MIR5588-201ENST00000581890 63 ntBASIC6.45□□□□□ -1.38
CD44P16070 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.45□□□□□ -1.38
CD44P16070 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC6.45□□□□□ -1.38
CD44P16070 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.45□□□□□ -1.38
CD44P16070 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.45□□□□□ -1.38
CD44P16070 AC007842.1-201ENST00000597336 2039 ntBASIC6.45□□□□□ -1.38
CD44P16070 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
CD44P16070 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CD44P16070 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
CD44P16070 AC004014.2-201ENST00000623718 5122 ntBASIC6.44□□□□□ -1.38
CD44P16070 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
CD44P16070 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
CD44P16070 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.44□□□□□ -1.38
CD44P16070 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD44P16070 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.44□□□□□ -1.38
CD44P16070 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CD44P16070 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CD44P16070 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CD44P16070 RNU1-62P-201ENST00000362599 164 ntBASIC6.44□□□□□ -1.38
CD44P16070 Y_RNA.243-201ENST00000364481 109 ntBASIC6.44□□□□□ -1.38
CD44P16070 MIR181B1-201ENST00000385240 110 ntBASIC6.44□□□□□ -1.38
CD44P16070 MIR891A-201ENST00000401237 79 ntBASIC6.44□□□□□ -1.38
CD44P16070 ANP32BP2-201ENST00000454525 545 ntBASIC6.44□□□□□ -1.38
CD44P16070 RNU7-171P-201ENST00000459581 62 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms