Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 Y_RNA.608-201ENST00000410647 95 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.68□□□□□ -1.98
SFTPBP07988 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.68□□□□□ -1.98
SFTPBP07988 AL365203.2-201ENST00000423444 196 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.68□□□□□ -1.98
SFTPBP07988 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.68□□□□□ -1.98
SFTPBP07988 HMGB1P27-201ENST00000431429 603 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 GPM6BP2-201ENST00000432046 144 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.68□□□□□ -1.98
SFTPBP07988 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.68□□□□□ -1.98
SFTPBP07988 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.68□□□□□ -1.98
SFTPBP07988 MTND1P30-201ENST00000441241 901 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 RPS12P18-201ENST00000442381 270 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 NEFMP1-201ENST00000443423 1006 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 GPM6BP1-201ENST00000446387 144 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.68□□□□□ -1.98
SFTPBP07988 RPL37P6-201ENST00000460682 294 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.68□□□□□ -1.98
SFTPBP07988 MRPS36P2-201ENST00000512569 299 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 RNU6-56P-201ENST00000516986 93 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
SFTPBP07988 MTCO1P47-201ENST00000523889 1271 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.68□□□□□ -1.98
SFTPBP07988 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.68□□□□□ -1.98
SFTPBP07988 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.68□□□□□ -1.98
SFTPBP07988 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.68□□□□□ -1.98
SFTPBP07988 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.68□□□□□ -1.98
SFTPBP07988 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.68□□□□□ -1.98
SFTPBP07988 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.68□□□□□ -1.98
SFTPBP07988 MIR548AB-201ENST00000584917 84 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AC012493.2-201ENST00000595083 291 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AC010620.2-201ENST00000600135 313 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AC007363.1-201ENST00000604736 620 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AL035413.2-201ENST00000604801 525 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AC103710.2-201ENST00000609912 942 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AC100793.4-201ENST00000613683 429 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AL162274.2-201ENST00000614406 332 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AC120349.3-201ENST00000624377 529 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 AC007494.3-201ENST00000624660 743 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 MTND5P29-201ENST00000458676 1807 ntBASIC2.68□□□□□ -1.98
SFTPBP07988 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SFTPBP07988 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
SFTPBP07988 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SFTPBP07988 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SFTPBP07988 RNA5SP374-201ENST00000362939 125 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.67□□□□□ -1.98
SFTPBP07988 SNORA48.5-201ENST00000391143 135 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.67□□□□□ -1.98
SFTPBP07988 FCF1P10-201ENST00000407590 479 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 RNU2-49P-201ENST00000410666 184 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 RNU6-193P-201ENST00000410977 107 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.67□□□□□ -1.98
SFTPBP07988 ZNF90P2-204ENST00000419323 1075 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.67□□□□□ -1.98
SFTPBP07988 RAC1P6-201ENST00000423911 575 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AL356583.2-201ENST00000426536 280 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 SETP8-201ENST00000435341 628 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.67□□□□□ -1.98
SFTPBP07988 UBE2D3P4-201ENST00000441973 436 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.67□□□□□ -1.98
SFTPBP07988 ELOCP23-201ENST00000452014 332 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.67□□□□□ -1.98
SFTPBP07988 AC010486.2-201ENST00000505572 483 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 MTND1P22-201ENST00000510572 951 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 RNA5SP76-201ENST00000516277 87 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 RNU1-103P-201ENST00000516502 125 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 SNORA31.26-201ENST00000517250 137 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC090136.1-201ENST00000520009 240 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC106038.2-201ENST00000520706 568 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.67□□□□□ -1.98
SFTPBP07988 AC087373.1-201ENST00000524920 491 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.67□□□□□ -1.98
SFTPBP07988 AC128657.1-201ENST00000549459 145 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AL359212.1-201ENST00000556608 614 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.67□□□□□ -1.98
SFTPBP07988 H3F3AP1-201ENST00000559984 334 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC135628.1-201ENST00000568867 534 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.67□□□□□ -1.98
SFTPBP07988 AL355877.2-201ENST00000603670 358 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC092354.1-201ENST00000606057 376 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC069234.5-201ENST00000611056 416 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.67□□□□□ -1.98
SFTPBP07988 AC092140.2-201ENST00000618027 521 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC090617.7-201ENST00000623952 126 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 AC026422.1-201ENST00000623961 452 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SFTPBP07988 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SFTPBP07988 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.67□□□□□ -1.98
SFTPBP07988 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SFTPBP07988 AC092435.3-201ENST00000565538 3654 ntBASIC2.66□□□□□ -1.98
SFTPBP07988 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.66□□□□□ -1.98
SFTPBP07988 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SFTPBP07988 RNU6-511P-201ENST00000363496 107 ntBASIC2.66□□□□□ -1.98
SFTPBP07988 RNU6-288P-201ENST00000363690 104 ntBASIC2.66□□□□□ -1.98
SFTPBP07988 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.66□□□□□ -1.98
SFTPBP07988 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.66□□□□□ -1.98
SFTPBP07988 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SFTPBP07988 RNU2-68P-201ENST00000410878 191 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms