Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
PDGFAP04085 AP000560.1-201ENST00000624150 1937 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDGFAP04085 RNU6-428P-201ENST00000362942 107 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 RNU1-32P-201ENST00000363937 159 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 MIR1182-201ENST00000408363 97 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 COX5BP7-201ENST00000414780 274 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
PDGFAP04085 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFAP04085 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFAP04085 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFAP04085 SUMO1P2-201ENST00000452524 304 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFAP04085 SNORA70.16-201ENST00000516390 95 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFAP04085 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDGFAP04085 TRAV28-201ENST00000557548 323 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFAP04085 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 AC006557.5-201ENST00000603126 811 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 AC131238.1-201ENST00000617135 328 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 AC027309.3-201ENST00000623419 351 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 AC126323.6-202ENST00000568092 3511 ntBASIC4.8□□□□□ -1.64
PDGFAP04085 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFAP04085 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFAP04085 AC008568.2-201ENST00000623862 2313 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFAP04085 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
PDGFAP04085 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFAP04085 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
PDGFAP04085 AC092681.1-201ENST00000297369 291 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 RNA5SP505-201ENST00000364748 108 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 RNA5SP241-201ENST00000391326 114 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 MIR190B-201ENST00000401119 79 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 AC098614.2-201ENST00000426040 255 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.79□□□□□ -1.64
PDGFAP04085 HMGB1P35-201ENST00000503360 598 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFAP04085 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFAP04085 RNA5SP464-201ENST00000516251 108 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 Y_RNA.673-201ENST00000516306 88 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFAP04085 EDDM3DP-201ENST00000554692 434 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 AC040958.1-201ENST00000561102 201 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PDGFAP04085 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 AC099506.2-201ENST00000623074 221 ntBASIC4.79□□□□□ -1.64
PDGFAP04085 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFAP04085 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFAP04085 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFAP04085 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFAP04085 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PDGFAP04085 AL136964.1-201ENST00000622038 2990 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFAP04085 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFAP04085 RN7SKP113-201ENST00000363891 295 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 RNA5SP428-201ENST00000365129 132 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 MIR548H3-201ENST00000408771 118 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 RN7SKP114-201ENST00000410327 279 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 DDX39BP1-205ENST00000422507 192 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 C4BPAP2-201ENST00000428434 478 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.78□□□□□ -1.64
PDGFAP04085 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.78□□□□□ -1.64
PDGFAP04085 RPS29P27-201ENST00000463711 170 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 AL591473.1-201ENST00000464297 313 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 RN7SL481P-201ENST00000477764 299 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 NIP7P2-201ENST00000485801 544 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 Y_RNA.713-201ENST00000517013 96 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.78□□□□□ -1.64
PDGFAP04085 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFAP04085 AC010186.2-204ENST00000537668 439 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.78□□□□□ -1.64
PDGFAP04085 AC104581.2-201ENST00000572227 430 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 AC023575.1-201ENST00000580510 358 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.78□□□□□ -1.64
PDGFAP04085 MIR4270-201ENST00000581799 70 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 MIR4737-201ENST00000583979 81 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PDGFAP04085 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFAP04085 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PDGFAP04085 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
PDGFAP04085 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFAP04085 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFAP04085 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFAP04085 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDGFAP04085 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFAP04085 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFAP04085 Z95331.1-201ENST00000623075 23112 ntBASIC4.78□□□□□ -1.64
PDGFAP04085 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.65
PDGFAP04085 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFAP04085 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms