Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MTND1P9-201ENST00000453775 944 ntBASIC3.05□□□□□ -1.92
VTNP04004 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.05□□□□□ -1.92
VTNP04004 SNORD42A-201ENST00000459584 64 ntBASIC3.05□□□□□ -1.92
VTNP04004 KC877373.1-201ENST00000479066 408 ntBASIC3.05□□□□□ -1.92
VTNP04004 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.05□□□□□ -1.92
VTNP04004 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.05□□□□□ -1.92
VTNP04004 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.05□□□□□ -1.92
VTNP04004 Y_RNA.655-201ENST00000515919 96 ntBASIC3.05□□□□□ -1.92
VTNP04004 RNU6-201P-201ENST00000517100 61 ntBASIC3.05□□□□□ -1.92
VTNP04004 AP003467.2-201ENST00000520175 319 ntBASIC3.05□□□□□ -1.92
VTNP04004 AP003392.2-201ENST00000527269 208 ntBASIC3.05□□□□□ -1.92
VTNP04004 DEFB108D-201ENST00000527787 222 ntBASIC3.05□□□□□ -1.92
VTNP04004 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.05□□□□□ -1.92
VTNP04004 HPRT1P3-201ENST00000539521 576 ntBASIC3.05□□□□□ -1.92
VTNP04004 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.05□□□□□ -1.92
VTNP04004 AC108747.1-201ENST00000609508 535 ntBASIC3.05□□□□□ -1.92
VTNP04004 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.05□□□□□ -1.92
VTNP04004 AC005858.4-201ENST00000623191 700 ntBASIC3.05□□□□□ -1.92
VTNP04004 AC019226.1-201ENST00000625666 515 ntBASIC3.05□□□□□ -1.92
VTNP04004 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
VTNP04004 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
VTNP04004 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VTNP04004 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.05□□□□□ -1.92
VTNP04004 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.05□□□□□ -1.92
VTNP04004 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VTNP04004 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
VTNP04004 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VTNP04004 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
VTNP04004 RNU6-348P-201ENST00000384386 107 ntBASIC3.04□□□□□ -1.92
VTNP04004 MIR196B-201ENST00000384852 84 ntBASIC3.04□□□□□ -1.92
VTNP04004 MIR19A-201ENST00000384878 82 ntBASIC3.04□□□□□ -1.92
VTNP04004 MIR34A-201ENST00000385130 110 ntBASIC3.04□□□□□ -1.92
VTNP04004 RPL21P3-201ENST00000395517 478 ntBASIC3.04□□□□□ -1.92
VTNP04004 RPS4XP8-201ENST00000402039 771 ntBASIC3.04□□□□□ -1.92
VTNP04004 RPS3AP24-201ENST00000407896 734 ntBASIC3.04□□□□□ -1.92
VTNP04004 AL663109.1-201ENST00000411498 844 ntBASIC3.04□□□□□ -1.92
VTNP04004 MTCO3P41-201ENST00000414801 328 ntBASIC3.04□□□□□ -1.92
VTNP04004 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.04□□□□□ -1.92
VTNP04004 AL353777.1-201ENST00000425552 326 ntBASIC3.04□□□□□ -1.92
VTNP04004 AL589872.1-201ENST00000426602 288 ntBASIC3.04□□□□□ -1.92
VTNP04004 AC024082.2-201ENST00000434771 238 ntBASIC3.04□□□□□ -1.92
VTNP04004 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.04□□□□□ -1.92
VTNP04004 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.04□□□□□ -1.92
VTNP04004 AC146507.2-201ENST00000460608 476 ntBASIC3.04□□□□□ -1.92
VTNP04004 RPS15AP36-201ENST00000492022 382 ntBASIC3.04□□□□□ -1.92
VTNP04004 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.04□□□□□ -1.92
VTNP04004 SNORA18.6-201ENST00000516792 115 ntBASIC3.04□□□□□ -1.92
VTNP04004 RNU2-46P-201ENST00000517038 113 ntBASIC3.04□□□□□ -1.92
VTNP04004 AP002963.1-201ENST00000530590 184 ntBASIC3.04□□□□□ -1.92
VTNP04004 AP003122.4-201ENST00000530980 758 ntBASIC3.04□□□□□ -1.92
VTNP04004 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.04□□□□□ -1.92
VTNP04004 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.04□□□□□ -1.92
VTNP04004 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.04□□□□□ -1.92
VTNP04004 MIR3913-1-201ENST00000577744 102 ntBASIC3.04□□□□□ -1.92
VTNP04004 MIR4528-201ENST00000577763 90 ntBASIC3.04□□□□□ -1.92
VTNP04004 MIR3146-201ENST00000580367 79 ntBASIC3.04□□□□□ -1.92
VTNP04004 MIR3118-1-201ENST00000581787 76 ntBASIC3.04□□□□□ -1.92
VTNP04004 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.04□□□□□ -1.92
VTNP04004 AC106900.2-201ENST00000604994 317 ntBASIC3.04□□□□□ -1.92
VTNP04004 AP001506.1-201ENST00000615444 211 ntBASIC3.04□□□□□ -1.92
VTNP04004 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VTNP04004 AC009509.4-201ENST00000619202 509 ntBASIC3.04□□□□□ -1.92
VTNP04004 AC099842.1-201ENST00000619919 596 ntBASIC3.04□□□□□ -1.92
VTNP04004 MTND5P27-201ENST00000428871 1720 ntBASIC3.04□□□□□ -1.92
VTNP04004 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.04□□□□□ -1.92
VTNP04004 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.03□□□□□ -1.92
VTNP04004 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VTNP04004 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
VTNP04004 RNU6-1119P-201ENST00000384349 108 ntBASIC3.03□□□□□ -1.92
VTNP04004 MIR591-201ENST00000385290 95 ntBASIC3.03□□□□□ -1.92
VTNP04004 RNA5SP21-201ENST00000410917 96 ntBASIC3.03□□□□□ -1.92
VTNP04004 MTND1P21-201ENST00000412991 285 ntBASIC3.03□□□□□ -1.92
VTNP04004 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.03□□□□□ -1.92
VTNP04004 BX295541.1-201ENST00000417774 250 ntBASIC3.03□□□□□ -1.92
VTNP04004 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.03□□□□□ -1.92
VTNP04004 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.03□□□□□ -1.92
VTNP04004 USP9YP14-201ENST00000430663 563 ntBASIC3.03□□□□□ -1.92
VTNP04004 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.03□□□□□ -1.92
VTNP04004 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.03□□□□□ -1.92
VTNP04004 AC119618.1-201ENST00000434191 222 ntBASIC3.03□□□□□ -1.92
VTNP04004 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.03□□□□□ -1.92
VTNP04004 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.03□□□□□ -1.92
VTNP04004 RPL35AP22-201ENST00000436855 335 ntBASIC3.03□□□□□ -1.92
VTNP04004 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.03□□□□□ -1.92
VTNP04004 USP9YP15-201ENST00000442391 422 ntBASIC3.03□□□□□ -1.92
VTNP04004 MTND6P13-201ENST00000443510 523 ntBASIC3.03□□□□□ -1.92
VTNP04004 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.03□□□□□ -1.92
VTNP04004 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.03□□□□□ -1.92
VTNP04004 AP002884.2-201ENST00000471647 395 ntBASIC3.03□□□□□ -1.92
VTNP04004 AC126389.1-201ENST00000477436 290 ntBASIC3.03□□□□□ -1.92
VTNP04004 AC012181.1-201ENST00000479895 423 ntBASIC3.03□□□□□ -1.92
VTNP04004 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.03□□□□□ -1.92
VTNP04004 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.03□□□□□ -1.92
VTNP04004 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.03□□□□□ -1.92
VTNP04004 Y_RNA.672-201ENST00000516289 104 ntBASIC3.03□□□□□ -1.92
VTNP04004 RNA5SP380-201ENST00000517190 98 ntBASIC3.03□□□□□ -1.92
VTNP04004 AC107934.1-201ENST00000522215 217 ntBASIC3.03□□□□□ -1.92
VTNP04004 AP001804.3-201ENST00000525146 880 ntBASIC3.03□□□□□ -1.92
VTNP04004 AP000857.1-201ENST00000532151 543 ntBASIC3.03□□□□□ -1.92
VTNP04004 MIR4474-201ENST00000579189 78 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms