Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC022634.1-201ENST00000520765 532 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.63□□□□□ -2.15
COL1A1P02452 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.63□□□□□ -2.15
COL1A1P02452 AC011260.1-201ENST00000578420 472 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC005498.1-201ENST00000592125 465 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC002487.1-201ENST00000604565 994 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC079791.1-201ENST00000605356 973 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC073968.1-201ENST00000618594 637 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AL137003.2-201ENST00000606924 2538 ntBASIC1.62□□□□□ -2.15
COL1A1P02452 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
COL1A1P02452 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL1A1P02452 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.62□□□□□ -2.15
COL1A1P02452 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.62□□□□□ -2.15
COL1A1P02452 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.62□□□□□ -2.15
COL1A1P02452 OR52A4P-202ENST00000481634 799 ntBASIC1.62□□□□□ -2.15
COL1A1P02452 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.62□□□□□ -2.15
COL1A1P02452 NDUFB4P2-201ENST00000509515 391 ntBASIC1.62□□□□□ -2.15
COL1A1P02452 RN7SKP49-201ENST00000516675 260 ntBASIC1.62□□□□□ -2.15
COL1A1P02452 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.62□□□□□ -2.15
COL1A1P02452 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.62□□□□□ -2.15
COL1A1P02452 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.62□□□□□ -2.15
COL1A1P02452 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.62□□□□□ -2.15
COL1A1P02452 AC091895.1-201ENST00000624494 256 ntBASIC1.62□□□□□ -2.15
COL1A1P02452 U6.107-201ENST00000637108 79 ntBASIC1.62□□□□□ -2.15
COL1A1P02452 AC119674.1-220ENST00000641502 1048 ntBASIC1.62□□□□□ -2.15
COL1A1P02452 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL1A1P02452 CENPCP1-201ENST00000533085 2578 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 CDC27P3-201ENST00000635418 1910 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL1A1P02452 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
COL1A1P02452 SNORA40.6-201ENST00000391153 128 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 RNU6-1197P-201ENST00000391183 107 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.61□□□□□ -2.15
COL1A1P02452 SNRPGP13-201ENST00000442212 177 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 AC004022.1-201ENST00000447766 1066 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 MTND2P19-201ENST00000449129 1012 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.61□□□□□ -2.15
COL1A1P02452 TRGVB-201ENST00000453257 471 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 AC087588.1-201ENST00000462203 316 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 RPS27P21-201ENST00000486977 252 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 SNORA31.23-201ENST00000517219 133 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.61□□□□□ -2.15
COL1A1P02452 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.61□□□□□ -2.15
COL1A1P02452 AC084364.2-201ENST00000546924 395 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 HMGB1P14-201ENST00000557424 591 ntBASIC1.61□□□□□ -2.15
COL1A1P02452 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.61□□□□□ -2.15
COL1A1P02452 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.61□□□□□ -2.15
COL1A1P02452 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.61□□□□□ -2.15
COL1A1P02452 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
COL1A1P02452 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.61□□□□□ -2.15
COL1A1P02452 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL1A1P02452 RNU1-22P-201ENST00000363334 158 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL1A1P02452 MIR520E-201ENST00000384867 87 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 MIR767-201ENST00000390228 109 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 SNORD23.1-201ENST00000408212 104 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 RNU6-272P-201ENST00000411028 104 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 AC074117.2-201ENST00000417130 397 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.6□□□□□ -2.15
COL1A1P02452 ARF4P4-201ENST00000439608 520 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 AL589880.1-201ENST00000448271 287 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.6□□□□□ -2.15
COL1A1P02452 RPL7P18-201ENST00000478965 734 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.6□□□□□ -2.15
COL1A1P02452 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.6□□□□□ -2.15
COL1A1P02452 CASP1P1-201ENST00000526345 212 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 CYCSP26-201ENST00000534107 320 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.6□□□□□ -2.15
COL1A1P02452 AC074029.2-201ENST00000551045 634 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.6□□□□□ -2.15
COL1A1P02452 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.6□□□□□ -2.15
COL1A1P02452 AGGF1P5-201ENST00000567900 919 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.6□□□□□ -2.15
COL1A1P02452 AC097468.3-201ENST00000607956 456 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 AC009090.3-201ENST00000616553 565 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 AC018926.3-201ENST00000618841 406 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 MIR6788-201ENST00000618842 66 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 AL031601.2-202ENST00000622650 282 ntBASIC1.6□□□□□ -2.15
COL1A1P02452 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.6□□□□□ -2.15
COL1A1P02452 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL1A1P02452 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL1A1P02452 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.59□□□□□ -2.15
COL1A1P02452 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
COL1A1P02452 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
COL1A1P02452 RNU4-23P-201ENST00000362839 140 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 RNU4-41P-201ENST00000364426 143 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 RNU6-441P-201ENST00000384545 106 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 AC007098.1-201ENST00000420122 367 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.59□□□□□ -2.15
COL1A1P02452 AC092573.2-201ENST00000434546 243 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.59□□□□□ -2.15
COL1A1P02452 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.59□□□□□ -2.15
COL1A1P02452 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
COL1A1P02452 AC097493.1-201ENST00000463958 372 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms