Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPTM1O96005 AP001094.1-201ENST00000579805 193 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 AC067852.3-201ENST00000589177 561 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 BNIP3P33-201ENST00000598912 569 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 AC012119.1-201ENST00000603184 222 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 AL450472.3-201ENST00000615578 367 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 U6atac.1-201ENST00000616025 117 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 AC015967.1-201ENST00000619893 476 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 SNORD39.4-201ENST00000620099 78 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 AL161912.2-201ENST00000565707 3007 ntBASIC3.06□□□□□ -1.92
CLPTM1O96005 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
CLPTM1O96005 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLPTM1O96005 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.05□□□□□ -1.92
CLPTM1O96005 ZNF807-201ENST00000328088 1707 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.05□□□□□ -1.92
CLPTM1O96005 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.05□□□□□ -1.92
CLPTM1O96005 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 OR4G2P-201ENST00000328113 903 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 RNU5E-8P-201ENST00000363502 116 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 MIR218-2-201ENST00000385006 110 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 CALM2P3-201ENST00000400429 449 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 MTND1P21-201ENST00000412991 285 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 UBE2FP1-201ENST00000416536 447 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 MTCO3P12-201ENST00000416718 547 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLPTM1O96005 RPL7P10-201ENST00000417407 739 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AC099677.1-201ENST00000420575 175 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 MTCO3P30-201ENST00000426425 670 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AC073464.1-201ENST00000429823 534 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.05□□□□□ -1.92
CLPTM1O96005 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AL136380.1-201ENST00000447970 162 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 snoU13.4-201ENST00000458916 104 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 HMGB1P29-201ENST00000505659 499 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AC105914.1-201ENST00000511798 226 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 APOOP4-201ENST00000513530 597 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 RNU6-64P-201ENST00000517119 105 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AC018630.1-201ENST00000541376 925 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.05□□□□□ -1.92
CLPTM1O96005 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.05□□□□□ -1.92
CLPTM1O96005 AL391646.1-201ENST00000603860 190 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AL022099.1-201ENST00000604551 712 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AC068944.2-201ENST00000610373 403 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AC002076.2-201ENST00000617362 122 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AC243312.2-201ENST00000623340 601 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AC091903.1-201ENST00000624322 454 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 AC019226.1-201ENST00000625666 515 ntBASIC3.05□□□□□ -1.92
CLPTM1O96005 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CLPTM1O96005 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLPTM1O96005 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
CLPTM1O96005 Y_RNA.1-201ENST00000352915 104 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 Y_RNA.409-201ENST00000383990 98 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 RNU6-39P-201ENST00000384344 107 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 MIR449B-201ENST00000384995 97 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 RNU6-882P-201ENST00000391025 103 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 MTCO3P40-201ENST00000392516 676 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.04□□□□□ -1.92
CLPTM1O96005 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.04□□□□□ -1.92
CLPTM1O96005 RPL23AP30-201ENST00000432419 501 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AC002486.1-201ENST00000435098 391 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AC005094.1-201ENST00000440420 368 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.04□□□□□ -1.92
CLPTM1O96005 RPL21P23-201ENST00000446654 460 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AC132479.1-201ENST00000449160 144 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AC007182.2-201ENST00000489251 402 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 RPS15AP36-201ENST00000492022 382 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.04□□□□□ -1.92
CLPTM1O96005 AC011352.1-201ENST00000512300 793 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.04□□□□□ -1.92
CLPTM1O96005 AC022690.1-201ENST00000526681 550 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLPTM1O96005 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.04□□□□□ -1.92
CLPTM1O96005 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.04□□□□□ -1.92
CLPTM1O96005 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.04□□□□□ -1.92
CLPTM1O96005 SUB1P2-201ENST00000556401 297 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.04□□□□□ -1.92
CLPTM1O96005 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.04□□□□□ -1.92
CLPTM1O96005 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.04□□□□□ -1.92
CLPTM1O96005 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.04□□□□□ -1.92
CLPTM1O96005 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.04□□□□□ -1.92
CLPTM1O96005 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.04□□□□□ -1.92
CLPTM1O96005 U3.45-201ENST00000607547 219 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 AC103710.2-201ENST00000609912 942 ntBASIC3.04□□□□□ -1.92
CLPTM1O96005 MIR6130-201ENST00000619419 109 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms