Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
MSH5O43196 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 GTF2IP4-201ENST00000453092 2054 ntBASIC8.63□□□□□ -1.03
MSH5O43196 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.63□□□□□ -1.03
MSH5O43196 SNORD115-27-201ENST00000364430 82 ntBASIC8.63□□□□□ -1.03
MSH5O43196 RNA5SP172-201ENST00000365061 118 ntBASIC8.63□□□□□ -1.03
MSH5O43196 RNU6-614P-201ENST00000384369 107 ntBASIC8.63□□□□□ -1.03
MSH5O43196 AL662874.1-201ENST00000426065 230 ntBASIC8.63□□□□□ -1.03
MSH5O43196 AL121916.1-201ENST00000429405 308 ntBASIC8.63□□□□□ -1.03
MSH5O43196 Z75741.1-201ENST00000446793 314 ntBASIC8.63□□□□□ -1.03
MSH5O43196 AL451050.1-201ENST00000450126 415 ntBASIC8.63□□□□□ -1.03
MSH5O43196 RNU6-1218P-201ENST00000458990 108 ntBASIC8.63□□□□□ -1.03
MSH5O43196 AC093663.1-201ENST00000497190 394 ntBASIC8.63□□□□□ -1.03
MSH5O43196 AC107918.3-201ENST00000533272 382 ntBASIC8.63□□□□□ -1.03
MSH5O43196 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC8.63□□□□□ -1.03
MSH5O43196 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.63□□□□□ -1.03
MSH5O43196 U6.59-201ENST00000615686 107 ntBASIC8.63□□□□□ -1.03
MSH5O43196 MIR7854-201ENST00000620068 65 ntBASIC8.63□□□□□ -1.03
MSH5O43196 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.63□□□□□ -1.03
MSH5O43196 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
MSH5O43196 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MSH5O43196 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MSH5O43196 SAGE4P-201ENST00000442271 3381 ntBASIC8.62□□□□□ -1.03
MSH5O43196 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MSH5O43196 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
MSH5O43196 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MSH5O43196 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MSH5O43196 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MSH5O43196 RN7SKP81-201ENST00000365603 331 ntBASIC8.62□□□□□ -1.03
MSH5O43196 MIR605-201ENST00000385078 83 ntBASIC8.62□□□□□ -1.03
MSH5O43196 RNU6-882P-201ENST00000391025 103 ntBASIC8.62□□□□□ -1.03
MSH5O43196 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC8.62□□□□□ -1.03
MSH5O43196 RNU2-40P-201ENST00000410833 196 ntBASIC8.62□□□□□ -1.03
MSH5O43196 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC8.62□□□□□ -1.03
MSH5O43196 AL365496.1-201ENST00000426885 215 ntBASIC8.62□□□□□ -1.03
MSH5O43196 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.62□□□□□ -1.03
MSH5O43196 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.62□□□□□ -1.03
MSH5O43196 RNU6-126P-201ENST00000516685 103 ntBASIC8.62□□□□□ -1.03
MSH5O43196 RNU7-149P-201ENST00000516739 59 ntBASIC8.62□□□□□ -1.03
MSH5O43196 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.62□□□□□ -1.03
MSH5O43196 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC8.62□□□□□ -1.03
MSH5O43196 AC091133.5-201ENST00000603088 301 ntBASIC8.62□□□□□ -1.03
MSH5O43196 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
MSH5O43196 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
MSH5O43196 AC092692.1-201ENST00000623625 2595 ntBASIC8.62□□□□□ -1.03
MSH5O43196 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MSH5O43196 AL355834.1-201ENST00000556602 3965 ntBASIC8.62□□□□□ -1.03
MSH5O43196 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MSH5O43196 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH5O43196 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH5O43196 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
MSH5O43196 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MSH5O43196 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH5O43196 LCN1P2-201ENST00000372030 223 ntBASIC8.61□□□□□ -1.03
MSH5O43196 TEX41-205ENST00000431734 529 ntTSL 4 BASIC8.61□□□□□ -1.03
MSH5O43196 RN7SL174P-201ENST00000475578 289 ntBASIC8.61□□□□□ -1.03
MSH5O43196 RNA5SP290-201ENST00000517133 127 ntBASIC8.61□□□□□ -1.03
MSH5O43196 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC8.61□□□□□ -1.03
MSH5O43196 AL591767.3-201ENST00000554632 525 ntBASIC8.61□□□□□ -1.03
MSH5O43196 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC8.61□□□□□ -1.03
MSH5O43196 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC8.61□□□□□ -1.03
MSH5O43196 AC091193.1-201ENST00000604640 448 ntBASIC8.61□□□□□ -1.03
MSH5O43196 U6.73-201ENST00000619194 103 ntBASIC8.61□□□□□ -1.03
MSH5O43196 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.61□□□□□ -1.03
MSH5O43196 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MSH5O43196 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH5O43196 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH5O43196 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MSH5O43196 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
MSH5O43196 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
MSH5O43196 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MSH5O43196 RNU1-84P-201ENST00000365447 164 ntBASIC8.6□□□□□ -1.03
MSH5O43196 SNORA26.3-201ENST00000391119 136 ntBASIC8.6□□□□□ -1.03
MSH5O43196 RPL12P12-201ENST00000424633 501 ntBASIC8.6□□□□□ -1.03
MSH5O43196 AC097463.1-201ENST00000447288 481 ntBASIC8.6□□□□□ -1.03
MSH5O43196 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MSH5O43196 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.6□□□□□ -1.03
MSH5O43196 RN7SL165P-201ENST00000477476 291 ntBASIC8.6□□□□□ -1.03
MSH5O43196 AC008945.1-201ENST00000505144 499 ntBASIC8.6□□□□□ -1.03
MSH5O43196 AC027308.1-201ENST00000517993 110 ntBASIC8.6□□□□□ -1.03
MSH5O43196 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.6□□□□□ -1.03
MSH5O43196 MIR4662B-201ENST00000579498 81 ntBASIC8.6□□□□□ -1.03
MSH5O43196 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.6□□□□□ -1.03
MSH5O43196 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC8.6□□□□□ -1.03
MSH5O43196 U6.99-201ENST00000637524 83 ntBASIC8.6□□□□□ -1.03
MSH5O43196 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
MSH5O43196 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.6□□□□□ -1.03
MSH5O43196 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.6□□□□□ -1.03
MSH5O43196 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC8.6□□□□□ -1.03
MSH5O43196 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.6□□□□□ -1.03
MSH5O43196 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 263.4 ms