Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SNORA54-201ENST00000384281 123 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 RNU6-196P-201ENST00000384315 107 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 SNORD116-29-201ENST00000384516 83 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 RNU6-331P-201ENST00000384724 107 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 MIR1-2-201ENST00000384961 85 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 RNU2-39P-201ENST00000410604 198 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 Y_RNA.615-201ENST00000410769 117 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 MTCO2P27-201ENST00000420740 428 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 AL590639.1-201ENST00000456484 337 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 RPS15AP1-201ENST00000457423 391 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 RNU7-63P-201ENST00000459054 62 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 HMGN2P26-201ENST00000463169 339 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXN1O15353 KLHL2P1-201ENST00000508691 521 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 AC105417.1-201ENST00000514691 285 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 MIR2114-201ENST00000516645 80 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 Y_RNA.718-201ENST00000517110 102 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXN1O15353 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.24□□□□□ -1.73
FOXN1O15353 COX6CP8-201ENST00000522620 226 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXN1O15353 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXN1O15353 AC018552.3-201ENST00000567416 561 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 AC006270.2-201ENST00000578523 652 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXN1O15353 SNORD39.3-201ENST00000584451 71 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXN1O15353 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
FOXN1O15353 IGHV3-29-201ENST00000604817 344 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 AL627309.6-201ENST00000606857 840 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXN1O15353 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN1O15353 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN1O15353 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXN1O15353 AC118273.1-201ENST00000525324 3006 ntBASIC4.24□□□□□ -1.73
FOXN1O15353 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN1O15353 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN1O15353 AL049780.3-201ENST00000624612 1583 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXN1O15353 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN1O15353 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXN1O15353 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
FOXN1O15353 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXN1O15353 Y_RNA.31-201ENST00000362574 102 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 RNU6-1309P-201ENST00000363305 108 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 Y_RNA.255-201ENST00000364581 97 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 RNU6-108P-201ENST00000365558 107 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 RNU6-639P-201ENST00000384074 107 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 RNU6-831P-201ENST00000384548 107 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN1O15353 BEND7P1-201ENST00000422058 457 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 NUP35P1-201ENST00000422734 947 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN1O15353 AC006028.1-201ENST00000438379 402 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN1O15353 AC002381.1-201ENST00000447049 280 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN1O15353 MTND5P22-201ENST00000458380 195 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 MTCO2P29-201ENST00000465212 189 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN1O15353 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC093663.1-201ENST00000497190 394 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.23□□□□□ -1.73
FOXN1O15353 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN1O15353 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXN1O15353 TTC39CP1-201ENST00000512513 755 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN1O15353 AC005798.1-201ENST00000513715 387 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 RNU6-559P-201ENST00000516151 98 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC104986.1-201ENST00000517978 436 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC090572.1-201ENST00000519251 160 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC103783.1-201ENST00000520506 373 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN1O15353 AC022080.3-201ENST00000544433 482 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC008011.1-201ENST00000545989 227 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN1O15353 HSPE1P3-201ENST00000559254 309 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 MIR4503-201ENST00000582187 83 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN1O15353 AC010680.4-201ENST00000605334 543 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC019193.3-201ENST00000609144 554 ntBASIC4.23□□□□□ -1.73
FOXN1O15353 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN1O15353 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN1O15353 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
FOXN1O15353 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN1O15353 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
FOXN1O15353 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN1O15353 AC073343.1-201ENST00000328239 651 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 RNU6-343P-201ENST00000364709 104 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 RNU6-178P-201ENST00000384631 104 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 SNORD17-201ENST00000390930 237 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 RN7SKP58-201ENST00000411010 305 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN1O15353 AL451054.2-201ENST00000420896 202 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN1O15353 AC010881.1-201ENST00000433830 235 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 GPR143P-201ENST00000434155 205 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AL353597.2-202ENST00000434901 373 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 Z75741.1-201ENST00000446793 314 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms