Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.4□□□□□ -1.87
ATP2A1O14983 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ATP2A1O14983 RNU2-46P-201ENST00000517038 113 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.4□□□□□ -1.87
ATP2A1O14983 AC100870.1-201ENST00000522035 505 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.4□□□□□ -1.87
ATP2A1O14983 AL391156.1-201ENST00000554965 554 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.4□□□□□ -1.87
ATP2A1O14983 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.4□□□□□ -1.87
ATP2A1O14983 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.4□□□□□ -1.87
ATP2A1O14983 AC137800.2-201ENST00000574375 120 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 MIR3921-201ENST00000577308 85 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 MIR4528-201ENST00000577763 90 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.4□□□□□ -1.87
ATP2A1O14983 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.4□□□□□ -1.87
ATP2A1O14983 NRBF2P1-201ENST00000587407 859 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AC015871.2-201ENST00000603605 948 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AC008277.2-201ENST00000605196 797 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AC006566.1-201ENST00000608943 513 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 HULC.1-201ENST00000612720 240 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.4□□□□□ -1.87
ATP2A1O14983 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.4□□□□□ -1.87
ATP2A1O14983 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
ATP2A1O14983 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.4□□□□□ -1.87
ATP2A1O14983 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.4□□□□□ -1.87
ATP2A1O14983 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.4□□□□□ -1.87
ATP2A1O14983 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATP2A1O14983 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATP2A1O14983 RNY4P34-201ENST00000364779 95 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 RNY3P13-201ENST00000365542 102 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 SNORA36C-201ENST00000384289 132 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ATP2A1O14983 RPL23AP32-201ENST00000395315 459 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 UBE2V1P2-201ENST00000397758 440 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 RPL27AP8-201ENST00000424277 446 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.39□□□□□ -1.87
ATP2A1O14983 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.39□□□□□ -1.87
ATP2A1O14983 MTCO3P5-201ENST00000433620 714 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AC105272.1-201ENST00000438604 198 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AC073614.1-201ENST00000438690 650 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 RABEPKP1-201ENST00000440529 1026 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 GAPDHP17-201ENST00000449858 1001 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.39□□□□□ -1.87
ATP2A1O14983 AC008481.1-201ENST00000463278 396 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 KLF3P2-201ENST00000465138 268 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.39□□□□□ -1.87
ATP2A1O14983 AC082651.2-201ENST00000496833 166 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AC010587.1-201ENST00000505809 469 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 SNORA18.6-201ENST00000516792 115 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 RNU6-64P-201ENST00000517119 105 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.39□□□□□ -1.87
ATP2A1O14983 AC245166.1-201ENST00000521012 253 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATP2A1O14983 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.39□□□□□ -1.87
ATP2A1O14983 AP001029.3-201ENST00000588063 596 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.39□□□□□ -1.87
ATP2A1O14983 AC087683.1-201ENST00000591187 441 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.39□□□□□ -1.87
ATP2A1O14983 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.39□□□□□ -1.87
ATP2A1O14983 AC103591.3-201ENST00000608684 209 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AP002826.1-201ENST00000608835 315 ntBASIC3.39□□□□□ -1.87
ATP2A1O14983 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.39□□□□□ -1.87
ATP2A1O14983 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.39□□□□□ -1.87
ATP2A1O14983 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
ATP2A1O14983 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ATP2A1O14983 SRP72P2-201ENST00000344851 1979 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 RNU5A-1-201ENST00000362698 116 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 RNU4-1-201ENST00000363925 141 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 OR5H15-201ENST00000383696 930 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 SNORD116-4-201ENST00000384733 96 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.38□□□□□ -1.87
ATP2A1O14983 AL591034.1-201ENST00000407447 340 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 MIR1290-201ENST00000408735 78 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 RPL21P24-201ENST00000413752 448 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.38□□□□□ -1.87
ATP2A1O14983 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.38□□□□□ -1.87
ATP2A1O14983 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.38□□□□□ -1.87
ATP2A1O14983 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.38□□□□□ -1.87
ATP2A1O14983 HMGN2P13-201ENST00000476476 274 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.38□□□□□ -1.87
ATP2A1O14983 AC010265.1-201ENST00000513509 211 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.38□□□□□ -1.87
ATP2A1O14983 Y_RNA.655-201ENST00000515919 96 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 RN7SKP132-201ENST00000516001 208 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 RNU6-840P-201ENST00000517275 65 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.38□□□□□ -1.87
ATP2A1O14983 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.38□□□□□ -1.87
ATP2A1O14983 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.38□□□□□ -1.87
ATP2A1O14983 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.38□□□□□ -1.87
ATP2A1O14983 MIR4293-201ENST00000584305 78 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.38□□□□□ -1.87
ATP2A1O14983 AC104073.3-201ENST00000610942 955 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 AL589743.7-201ENST00000612637 233 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.38□□□□□ -1.87
ATP2A1O14983 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2A1O14983 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2A1O14983 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2A1O14983 MIR148B-201ENST00000362252 99 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 RNU5E-1-201ENST00000362477 120 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms