Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
SOX1O00570 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SOX1O00570 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SOX1O00570 AL451142.2-201ENST00000429076 2090 ntBASIC4.9□□□□□ -1.62
SOX1O00570 PRO1804-201ENST00000623780 2050 ntBASIC4.9□□□□□ -1.62
SOX1O00570 AC006484.1-201ENST00000435086 1884 ntBASIC4.9□□□□□ -1.62
SOX1O00570 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SOX1O00570 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SOX1O00570 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
SOX1O00570 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SOX1O00570 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
SOX1O00570 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SOX1O00570 RNU6-263P-201ENST00000363811 107 ntBASIC4.9□□□□□ -1.63
SOX1O00570 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SOX1O00570 Y_RNA.518-201ENST00000384552 113 ntBASIC4.9□□□□□ -1.63
SOX1O00570 PTMAP5-201ENST00000393073 333 ntBASIC4.9□□□□□ -1.63
SOX1O00570 RNU6-607P-201ENST00000411283 108 ntBASIC4.9□□□□□ -1.63
SOX1O00570 MTCO3P19-201ENST00000415864 321 ntBASIC4.9□□□□□ -1.63
SOX1O00570 AL590135.1-201ENST00000422215 156 ntBASIC4.9□□□□□ -1.63
SOX1O00570 MTND5P15-201ENST00000434246 349 ntBASIC4.9□□□□□ -1.63
SOX1O00570 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.9□□□□□ -1.63
SOX1O00570 AL360271.2-201ENST00000447710 161 ntBASIC4.9□□□□□ -1.63
SOX1O00570 RPS3AP46-201ENST00000448352 682 ntBASIC4.9□□□□□ -1.63
SOX1O00570 RPS11P1-201ENST00000451072 473 ntBASIC4.9□□□□□ -1.63
SOX1O00570 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SOX1O00570 RNU1-103P-201ENST00000516502 125 ntBASIC4.9□□□□□ -1.63
SOX1O00570 Y_RNA.687-201ENST00000516558 91 ntBASIC4.9□□□□□ -1.63
SOX1O00570 RNU6-182P-201ENST00000516970 105 ntBASIC4.9□□□□□ -1.63
SOX1O00570 RNU6-789P-201ENST00000517105 102 ntBASIC4.9□□□□□ -1.63
SOX1O00570 RNU6-897P-201ENST00000517135 105 ntBASIC4.9□□□□□ -1.63
SOX1O00570 SNRPGP16-201ENST00000533275 226 ntBASIC4.9□□□□□ -1.63
SOX1O00570 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.9□□□□□ -1.63
SOX1O00570 RPL23AP87-202ENST00000573039 466 ntBASIC4.9□□□□□ -1.63
SOX1O00570 LRRC37A5P-203ENST00000580181 585 ntBASIC4.9□□□□□ -1.63
SOX1O00570 SNORA74C-1-201ENST00000580726 201 ntBASIC4.9□□□□□ -1.63
SOX1O00570 MIR7853-201ENST00000584820 132 ntBASIC4.9□□□□□ -1.63
SOX1O00570 HMGB2P1-201ENST00000591146 634 ntBASIC4.9□□□□□ -1.63
SOX1O00570 RPS29P30-201ENST00000600975 111 ntBASIC4.9□□□□□ -1.63
SOX1O00570 AC006363.1-201ENST00000603806 463 ntBASIC4.9□□□□□ -1.63
SOX1O00570 AC137590.2-201ENST00000619709 240 ntBASIC4.9□□□□□ -1.63
SOX1O00570 SDR42E1P4-201ENST00000620894 481 ntBASIC4.9□□□□□ -1.63
SOX1O00570 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.9□□□□□ -1.63
SOX1O00570 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SOX1O00570 MAPK10-304ENST00000641341 3984 ntBASIC4.9□□□□□ -1.63
SOX1O00570 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.9□□□□□ -1.63
SOX1O00570 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX1O00570 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.9□□□□□ -1.63
SOX1O00570 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.9□□□□□ -1.63
SOX1O00570 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX1O00570 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.9□□□□□ -1.63
SOX1O00570 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
SOX1O00570 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX1O00570 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX1O00570 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX1O00570 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX1O00570 RNU6-249P-201ENST00000363016 102 ntBASIC4.89□□□□□ -1.63
SOX1O00570 MIR578-201ENST00000384828 96 ntBASIC4.89□□□□□ -1.63
SOX1O00570 MIR34B-201ENST00000385076 84 ntBASIC4.89□□□□□ -1.63
SOX1O00570 RPL7AP73-201ENST00000413490 353 ntBASIC4.89□□□□□ -1.63
SOX1O00570 RNU7-169P-201ENST00000459456 61 ntBASIC4.89□□□□□ -1.63
SOX1O00570 HMGB1P35-201ENST00000503360 598 ntBASIC4.89□□□□□ -1.63
SOX1O00570 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX1O00570 RNU6-138P-201ENST00000515952 107 ntBASIC4.89□□□□□ -1.63
SOX1O00570 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.89□□□□□ -1.63
SOX1O00570 RNU6-840P-201ENST00000517275 65 ntBASIC4.89□□□□□ -1.63
SOX1O00570 AC090517.1-201ENST00000569307 266 ntBASIC4.89□□□□□ -1.63
SOX1O00570 MIR548AC-201ENST00000585049 88 ntBASIC4.89□□□□□ -1.63
SOX1O00570 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX1O00570 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX1O00570 RNA5SP439-201ENST00000617595 124 ntBASIC4.89□□□□□ -1.63
SOX1O00570 AC130454.1-201ENST00000622948 401 ntBASIC4.89□□□□□ -1.63
SOX1O00570 FP236240.3-201ENST00000623061 327 ntBASIC4.89□□□□□ -1.63
SOX1O00570 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX1O00570 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX1O00570 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX1O00570 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX1O00570 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX1O00570 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 ZNF285B-201ENST00000561698 1767 ntBASIC4.88□□□□□ -1.63
SOX1O00570 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SOX1O00570 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SOX1O00570 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 RNU1-35P-201ENST00000362782 153 ntBASIC4.88□□□□□ -1.63
SOX1O00570 Y_RNA.785-201ENST00000384290 109 ntBASIC4.88□□□□□ -1.63
SOX1O00570 RNU6-933P-201ENST00000384424 107 ntBASIC4.88□□□□□ -1.63
SOX1O00570 SAR1AP2-201ENST00000392696 594 ntBASIC4.88□□□□□ -1.63
SOX1O00570 RNU6-325P-201ENST00000411132 105 ntBASIC4.88□□□□□ -1.63
SOX1O00570 SSXP9-201ENST00000417503 292 ntBASIC4.88□□□□□ -1.63
SOX1O00570 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 EIF4A1P11-201ENST00000451239 222 ntBASIC4.88□□□□□ -1.63
SOX1O00570 RPS15AP34-201ENST00000487776 387 ntBASIC4.88□□□□□ -1.63
SOX1O00570 NDUFB4P9-201ENST00000511646 388 ntBASIC4.88□□□□□ -1.63
SOX1O00570 AP003733.2-201ENST00000529409 171 ntBASIC4.88□□□□□ -1.63
SOX1O00570 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms