Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 Y_RNA.691-201ENST00000516611 103 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNU6-256P-201ENST00000516747 97 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNU6-1088P-201ENST00000516850 104 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNA5SP312-201ENST00000517068 116 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 IGKV2D-19-201ENST00000523346 262 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL157871.3-201ENST00000557231 293 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC053481.4-201ENST00000583164 216 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 SNORD39.4-201ENST00000620099 78 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 MIR492-201ENST00000638676 116 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 PNPT1P2-201ENST00000456768 2050 ntBASIC3.02□□□□□ -1.93
IGHV4-28A0A0C4DH34 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC006026.1-201ENST00000444025 1803 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNU1-15P-201ENST00000353977 144 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNA5SP479-201ENST00000364858 117 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNU6-1197P-201ENST00000391183 107 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL356967.1-201ENST00000406305 431 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 MIR1193-201ENST00000408109 78 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNU6-628P-201ENST00000410675 107 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RN7SKP263-201ENST00000411194 309 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 NCOR1P3-201ENST00000420479 303 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 NDUFB4P6-201ENST00000436819 366 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RPL23AP89-201ENST00000439324 255 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 CECR9-201ENST00000453421 199 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RPL21P104-201ENST00000464143 478 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RN7SL604P-201ENST00000492589 296 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 TRBVA-201ENST00000498804 316 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 Y_RNA.682-201ENST00000516457 100 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RN7SKP21-201ENST00000516503 220 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AP003122.3-201ENST00000526316 255 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC084851.1-201ENST00000529105 249 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 TRAV28-201ENST00000557548 323 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 MIR1273C-201ENST00000578669 77 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 MIR3941-201ENST00000582572 103 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 MIR5692C1-201ENST00000585309 91 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC002044.1-201ENST00000606707 158 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC128687.2-201ENST00000609657 566 ntBASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.01□□□□□ -1.93
IGHV4-28A0A0C4DH34 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 Y_RNA.33-201ENST00000362591 102 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNU4-79P-201ENST00000362764 141 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 Y_RNA.67-201ENST00000362870 100 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNA5SP130-201ENST00000364431 114 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 Y_RNA.474-201ENST00000384341 102 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNU1-13P-201ENST00000384499 162 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNU6-1179P-201ENST00000384667 107 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 MIR450B-201ENST00000401182 78 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 RNU6-1025P-201ENST00000410629 104 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 VN1R36P-201ENST00000414936 291 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 AL158156.1-201ENST00000422509 473 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC073063.1-201ENST00000434352 607 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 OR4C10P-201ENST00000434991 931 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 RANP8-201ENST00000444720 713 ntBASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3□□□□□ -1.93
IGHV4-28A0A0C4DH34 AC233279.1-201ENST00000455300 423 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms