Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
BIVM-ERCC5R4GMW8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 LBX2-AS1-202ENST00000603175 2083 ntBASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 DRAXINP1-201ENST00000437611 948 ntBASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 AC011498.5-201ENST00000592027 486 ntBASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 AL732292.2-201ENST00000609649 430 ntBASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 AC092667.1-201ENST00000434301 2586 ntBASIC31.81■■■□□ 2.68
BIVM-ERCC5R4GMW8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 MIR662-201ENST00000384847 95 ntBASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 UNC93B7-201ENST00000509439 705 ntBASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 AC012615.1-201ENST00000565797 1299 ntBASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
BIVM-ERCC5R4GMW8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 AL031008.1-201ENST00000619963 541 ntBASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
BIVM-ERCC5R4GMW8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
BIVM-ERCC5R4GMW8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC31.77■■■□□ 2.68
BIVM-ERCC5R4GMW8 KRT18P1-202ENST00000452408 1331 ntBASIC31.76■■■□□ 2.68
BIVM-ERCC5R4GMW8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
BIVM-ERCC5R4GMW8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
BIVM-ERCC5R4GMW8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC31.76■■■□□ 2.67
BIVM-ERCC5R4GMW8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
BIVM-ERCC5R4GMW8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
BIVM-ERCC5R4GMW8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC31.76■■■□□ 2.67
BIVM-ERCC5R4GMW8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
BIVM-ERCC5R4GMW8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
BIVM-ERCC5R4GMW8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC31.76■■■□□ 2.67
BIVM-ERCC5R4GMW8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
BIVM-ERCC5R4GMW8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC31.75■■■□□ 2.67
BIVM-ERCC5R4GMW8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC31.75■■■□□ 2.67
BIVM-ERCC5R4GMW8 TK1-205ENST00000590862 642 ntTSL 3 BASIC31.75■■■□□ 2.67
BIVM-ERCC5R4GMW8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC31.75■■■□□ 2.67
BIVM-ERCC5R4GMW8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC31.75■■■□□ 2.67
BIVM-ERCC5R4GMW8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC31.75■■■□□ 2.67
BIVM-ERCC5R4GMW8 AC112497.1-201ENST00000624824 639 ntBASIC31.75■■■□□ 2.67
BIVM-ERCC5R4GMW8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC31.75■■■□□ 2.67
BIVM-ERCC5R4GMW8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms