Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COPS3Q9UNS2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17■□□□□ 0.31
COPS3Q9UNS2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
COPS3Q9UNS2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COPS3Q9UNS2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17■□□□□ 0.31
COPS3Q9UNS2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
COPS3Q9UNS2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 AC006970.2-201ENST00000450065 779 ntBASIC16.99■□□□□ 0.31
COPS3Q9UNS2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 KRT18P16-201ENST00000510337 1294 ntBASIC16.99■□□□□ 0.31
COPS3Q9UNS2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.99■□□□□ 0.31
COPS3Q9UNS2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 AC090340.1-201ENST00000620778 4980 ntBASIC16.99■□□□□ 0.31
COPS3Q9UNS2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COPS3Q9UNS2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 AC090164.3-201ENST00000610780 2143 ntBASIC16.98■□□□□ 0.31
COPS3Q9UNS2 MYC-209ENST00000641252 345 ntBASIC16.98■□□□□ 0.31
COPS3Q9UNS2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.98■□□□□ 0.31
COPS3Q9UNS2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 HLA-B-256ENST00000639848 1089 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms