Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 TSPY7P-201ENST00000431358 1114 ntBASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 AP003071.4-201ENST00000562276 1284 ntBASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 AC130371.2-201ENST00000619443 611 ntBASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 RCC2P6-201ENST00000526625 1557 ntBASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PARPBPQ9NWS1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 B3GAT3P1-201ENST00000471720 806 ntBASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 Z85996.1-201ENST00000494644 937 ntBASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 DGCR10-201ENST00000609839 495 ntBASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 AC011298.2-201ENST00000617989 482 ntBASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 LINC01465-201ENST00000408887 1940 ntBASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PARPBPQ9NWS1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PARPBPQ9NWS1 TSPY21P-201ENST00000433481 731 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms