Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
SLC52A1Q9NWF4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SLC52A1Q9NWF4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SLC52A1Q9NWF4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC52A1Q9NWF4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 EMBP1-201ENST00000458200 901 ntBASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 RNF126P1-202ENST00000569893 925 ntBASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC27.32■■□□□ 1.96
SLC52A1Q9NWF4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 AC009078.2-202ENST00000463353 338 ntBASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 AL732292.2-201ENST00000609649 430 ntBASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 KRT8P7-201ENST00000533003 1432 ntBASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC52A1Q9NWF4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 AL121772.3-201ENST00000610840 674 ntBASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 AL031008.1-201ENST00000619963 541 ntBASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC52A1Q9NWF4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 AC099778.1-201ENST00000568593 1911 ntBASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 AC012615.1-201ENST00000565797 1299 ntBASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SLC52A1Q9NWF4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 AL160237.2-201ENST00000556165 472 ntBASIC27.28■■□□□ 1.96
SLC52A1Q9NWF4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SLC52A1Q9NWF4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms