Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHACTR1Q9C0D0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 GUSBP6-202ENST00000438529 1198 ntBASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 AC083906.2-201ENST00000511578 360 ntBASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 MIR4758-201ENST00000577688 71 ntBASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PHACTR1Q9C0D0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHACTR1Q9C0D0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHACTR1Q9C0D0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.33■□□□□ 0.69
PHACTR1Q9C0D0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PHACTR1Q9C0D0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 AC006970.2-201ENST00000450065 779 ntBASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 AC097658.1-201ENST00000475555 843 ntBASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHACTR1Q9C0D0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 NOC2LP2-201ENST00000407594 1944 ntBASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHACTR1Q9C0D0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
PHACTR1Q9C0D0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHACTR1Q9C0D0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHACTR1Q9C0D0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.31■□□□□ 0.68
PHACTR1Q9C0D0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHACTR1Q9C0D0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PHACTR1Q9C0D0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms