Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNTNAP3Q9BZ76 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 AC034232.1-201ENST00000506026 1064 ntBASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 MIR3687-2-201ENST00000577708 61 ntBASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 MIR3687-1-201ENST00000614492 61 ntBASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 AC073130.3-201ENST00000624389 2278 ntBASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CNTNAP3Q9BZ76 KRT8P36-201ENST00000489121 1440 ntBASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 KRT18P67-201ENST00000432816 1264 ntBASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 AC112482.1-201ENST00000492080 688 ntBASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 AC099336.1-202ENST00000602961 463 ntBASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 AC148477.8-201ENST00000624298 468 ntBASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNTNAP3Q9BZ76 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 RFPL4AP1-201ENST00000530883 850 ntBASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 KRT18P28-201ENST00000453838 1332 ntBASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTNAP3Q9BZ76 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.14■□□□□ 0.5
CNTNAP3Q9BZ76 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.14■□□□□ 0.5
CNTNAP3Q9BZ76 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
CNTNAP3Q9BZ76 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNTNAP3Q9BZ76 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNTNAP3Q9BZ76 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNTNAP3Q9BZ76 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CNTNAP3Q9BZ76 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 FAM99A-202ENST00000538190 1989 ntBASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 AF186996.4-201ENST00000467186 377 ntBASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 Z85996.1-201ENST00000494644 937 ntBASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 LINC00167-201ENST00000530583 1419 ntBASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTNAP3Q9BZ76 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms