Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 AL032819.2-201ENST00000624543 2162 ntBASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPAP1Q9BWH6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 SLC25A1P2-201ENST00000430693 912 ntBASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 BX664615.1-201ENST00000443558 458 ntBASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RPAP1Q9BWH6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 AL138966.2-201ENST00000621997 464 ntBASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 AC010653.2-201ENST00000623505 997 ntBASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 AC116562.4-202ENST00000641738 218 ntBASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPAP1Q9BWH6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 AK4P3-201ENST00000418260 669 ntBASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 AC117947.1-201ENST00000427448 529 ntBASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 CCR12P-201ENST00000446203 998 ntBASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RPAP1Q9BWH6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 FAM8A6P-201ENST00000407496 1135 ntBASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 AC091390.4-202ENST00000476426 537 ntBASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 AL160286.2-201ENST00000567150 934 ntBASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 LINC01238-205ENST00000567549 1107 ntBASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
RPAP1Q9BWH6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.13■■□□□ 1.29
RPAP1Q9BWH6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RPAP1Q9BWH6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.13■■□□□ 1.29
RPAP1Q9BWH6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RPAP1Q9BWH6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.13■■□□□ 1.29
RPAP1Q9BWH6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RPAP1Q9BWH6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms