Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40CQ96S21 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40CQ96S21 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40CQ96S21 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RAB40CQ96S21 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB40CQ96S21 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB40CQ96S21 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.47■□□□□ 0.07
RAB40CQ96S21 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 AP000997.3-201ENST00000623333 2250 ntBASIC15.47■□□□□ 0.07
RAB40CQ96S21 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 AC104417.2-201ENST00000562989 1793 ntBASIC15.47■□□□□ 0.07
RAB40CQ96S21 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 AL162430.1-201ENST00000480705 870 ntBASIC15.47■□□□□ 0.07
RAB40CQ96S21 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 ANO7L1-203ENST00000602586 1720 ntBASIC15.47■□□□□ 0.07
RAB40CQ96S21 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAB40CQ96S21 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB40CQ96S21 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 FEM1AP3-201ENST00000403722 1741 ntBASIC15.46■□□□□ 0.07
RAB40CQ96S21 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 KRT18P11-201ENST00000435214 1283 ntBASIC15.46■□□□□ 0.07
RAB40CQ96S21 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40CQ96S21 SDHAP1-207ENST00000440850 2000 ntBASIC15.46■□□□□ 0.07
RAB40CQ96S21 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40CQ96S21 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40CQ96S21 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40CQ96S21 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40CQ96S21 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40CQ96S21 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40CQ96S21 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40CQ96S21 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RAB40CQ96S21 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RAB40CQ96S21 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40CQ96S21 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40CQ96S21 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40CQ96S21 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.45■□□□□ 0.06
RAB40CQ96S21 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40CQ96S21 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.45■□□□□ 0.06
RAB40CQ96S21 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RAB40CQ96S21 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms