Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH3Q96II8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
LRCH3Q96II8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH3Q96II8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRCH3Q96II8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.64■□□□□ 0.9
LRCH3Q96II8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LRCH3Q96II8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LRCH3Q96II8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRCH3Q96II8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LRCH3Q96II8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
LRCH3Q96II8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.64■□□□□ 0.89
LRCH3Q96II8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.64■□□□□ 0.89
LRCH3Q96II8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.64■□□□□ 0.89
LRCH3Q96II8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 MIR4674-201ENST00000582457 87 ntBASIC20.64■□□□□ 0.89
LRCH3Q96II8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.64■□□□□ 0.89
LRCH3Q96II8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.64■□□□□ 0.89
LRCH3Q96II8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH3Q96II8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.64■□□□□ 0.89
LRCH3Q96II8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.63■□□□□ 0.89
LRCH3Q96II8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.63■□□□□ 0.89
LRCH3Q96II8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.63■□□□□ 0.89
LRCH3Q96II8 FAM197Y8-203ENST00000450145 560 ntBASIC20.63■□□□□ 0.89
LRCH3Q96II8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.63■□□□□ 0.89
LRCH3Q96II8 REXO1L6P-202ENST00000619970 1078 ntBASIC20.63■□□□□ 0.89
LRCH3Q96II8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
LRCH3Q96II8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.63■□□□□ 0.89
LRCH3Q96II8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LRCH3Q96II8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LRCH3Q96II8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.63■□□□□ 0.89
LRCH3Q96II8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH3Q96II8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH3Q96II8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH3Q96II8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH3Q96II8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH3Q96II8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH3Q96II8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.62■□□□□ 0.89
LRCH3Q96II8 RPL13AP23-201ENST00000480739 586 ntBASIC20.62■□□□□ 0.89
LRCH3Q96II8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH3Q96II8 AL160286.2-201ENST00000567150 934 ntBASIC20.62■□□□□ 0.89
LRCH3Q96II8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.62■□□□□ 0.89
LRCH3Q96II8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH3Q96II8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH3Q96II8 AC148477.8-201ENST00000624298 468 ntBASIC20.62■□□□□ 0.89
LRCH3Q96II8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH3Q96II8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH3Q96II8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH3Q96II8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH3Q96II8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH3Q96II8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH3Q96II8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH3Q96II8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH3Q96II8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH3Q96II8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH3Q96II8 FEM1AP4-201ENST00000443167 1987 ntBASIC20.61■□□□□ 0.89
LRCH3Q96II8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH3Q96II8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH3Q96II8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.61■□□□□ 0.89
LRCH3Q96II8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.61■□□□□ 0.89
LRCH3Q96II8 RNF126P1-202ENST00000569893 925 ntBASIC20.61■□□□□ 0.89
LRCH3Q96II8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.61■□□□□ 0.89
LRCH3Q96II8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.61■□□□□ 0.89
LRCH3Q96II8 AC079602.3-201ENST00000623931 403 ntBASIC20.61■□□□□ 0.89
LRCH3Q96II8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.61■□□□□ 0.89
LRCH3Q96II8 AL157384.1-201ENST00000445995 2473 ntBASIC20.61■□□□□ 0.89
LRCH3Q96II8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.6■□□□□ 0.89
LRCH3Q96II8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH3Q96II8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH3Q96II8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH3Q96II8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH3Q96II8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LRCH3Q96II8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.6■□□□□ 0.89
LRCH3Q96II8 HTR5BP-201ENST00000430851 1154 ntBASIC20.6■□□□□ 0.89
LRCH3Q96II8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.6■□□□□ 0.89
LRCH3Q96II8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.6■□□□□ 0.89
LRCH3Q96II8 AC010327.4-202ENST00000591484 748 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms