Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX11Q96FC9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
DDX11Q96FC9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX11Q96FC9 KRT8P9-201ENST00000558927 1449 ntBASIC22.63■■□□□ 1.21
DDX11Q96FC9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
DDX11Q96FC9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX11Q96FC9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX11Q96FC9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX11Q96FC9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX11Q96FC9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX11Q96FC9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX11Q96FC9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 AC116562.2-201ENST00000507042 360 ntBASIC22.62■■□□□ 1.21
DDX11Q96FC9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 AC004408.2-201ENST00000623613 2777 ntBASIC22.62■■□□□ 1.21
DDX11Q96FC9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
DDX11Q96FC9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX11Q96FC9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX11Q96FC9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
DDX11Q96FC9 BX323043.1-201ENST00000641006 1765 ntBASIC22.61■■□□□ 1.21
DDX11Q96FC9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX11Q96FC9 SDHAP1-207ENST00000440850 2000 ntBASIC22.61■■□□□ 1.21
DDX11Q96FC9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.61■■□□□ 1.21
DDX11Q96FC9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX11Q96FC9 RN7SL850P-201ENST00000579959 291 ntBASIC22.61■■□□□ 1.21
DDX11Q96FC9 AC145285.6-201ENST00000604632 637 ntBASIC22.61■■□□□ 1.21
DDX11Q96FC9 AC005363.2-201ENST00000618631 242 ntBASIC22.61■■□□□ 1.21
DDX11Q96FC9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.61■■□□□ 1.21
DDX11Q96FC9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
DDX11Q96FC9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX11Q96FC9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX11Q96FC9 TEX21P-204ENST00000641479 1693 ntBASIC22.61■■□□□ 1.21
DDX11Q96FC9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
DDX11Q96FC9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.6■■□□□ 1.21
DDX11Q96FC9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX11Q96FC9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX11Q96FC9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX11Q96FC9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.6■■□□□ 1.21
DDX11Q96FC9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DDX11Q96FC9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX11Q96FC9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.6■■□□□ 1.21
DDX11Q96FC9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX11Q96FC9 KRT8P8-201ENST00000434750 1448 ntBASIC22.6■■□□□ 1.21
DDX11Q96FC9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX11Q96FC9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.6■■□□□ 1.21
DDX11Q96FC9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX11Q96FC9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX11Q96FC9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
DDX11Q96FC9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DDX11Q96FC9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX11Q96FC9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX11Q96FC9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.59■■□□□ 1.21
DDX11Q96FC9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.59■■□□□ 1.21
DDX11Q96FC9 TNXA-203ENST00000507684 2038 ntBASIC22.59■■□□□ 1.21
DDX11Q96FC9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
DDX11Q96FC9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
DDX11Q96FC9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.59■■□□□ 1.21
DDX11Q96FC9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.59■■□□□ 1.21
DDX11Q96FC9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.59■■□□□ 1.21
DDX11Q96FC9 AL390955.1-201ENST00000428694 934 ntBASIC22.59■■□□□ 1.21
DDX11Q96FC9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.59■■□□□ 1.21
DDX11Q96FC9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.59■■□□□ 1.21
DDX11Q96FC9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms