Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 ECEL1P2-202ENST00000465689 757 ntBASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 KRT8P3-201ENST00000519669 1449 ntBASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.08■□□□□ 0.65
ECHDC3Q96DC8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC3Q96DC8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 SLC25A3P1-201ENST00000443844 931 ntBASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 AC005363.2-201ENST00000618631 242 ntBASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.07■□□□□ 0.64
ECHDC3Q96DC8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 AC113347.1-201ENST00000413321 391 ntBASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 AP003041.3-201ENST00000527151 707 ntBASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ECHDC3Q96DC8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 HMGA1P5-201ENST00000412453 271 ntBASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms