Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 KRT8P3-201ENST00000519669 1449 ntBASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.7■□□□□ 0.42
CTHRC1Q96CG8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 UNC93B2-201ENST00000285383 730 ntBASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 MFAP1P1-201ENST00000442257 1255 ntBASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 AL355075.4-201ENST00000554988 638 ntBASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 AC079598.2-202ENST00000546624 1451 ntBASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTHRC1Q96CG8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 TNXA-203ENST00000507684 2038 ntBASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 SLC25A1P4-201ENST00000567977 778 ntBASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTHRC1Q96CG8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms