Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM43Q96BQ3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 AC009237.14-201ENST00000609975 1594 ntBASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 AC112497.1-201ENST00000624824 639 ntBASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 AC079834.2-201ENST00000609776 1949 ntBASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM43Q96BQ3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 LINC00167-201ENST00000530583 1419 ntBASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 PMS2P1-201ENST00000431037 1228 ntBASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM43Q96BQ3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 AL691432.2-201ENST00000607222 2038 ntBASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 MCCD1P1-208ENST00000445732 328 ntBASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 AC099336.1-202ENST00000602961 463 ntBASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 AP005212.1-201ENST00000581547 1997 ntBASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM43Q96BQ3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 RNA5SP419-201ENST00000515908 135 ntBASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 AC233702.3-201ENST00000578656 1387 ntBASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM43Q96BQ3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 AC090616.6-201ENST00000582640 721 ntBASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 AC005332.3-201ENST00000589904 676 ntBASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM43Q96BQ3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms