Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 AC068880.1-201ENST00000507289 2297 ntBASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 AL162741.1-201ENST00000565563 1558 ntBASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 AC083906.2-201ENST00000511578 360 ntBASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 DUSP5P2-201ENST00000426873 1033 ntBASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 TSPY21P-201ENST00000433481 731 ntBASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 AC104771.1-201ENST00000603335 964 ntBASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 AL133373.2-201ENST00000623187 2828 ntBASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4Y2Q8TD47 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 AC005332.8-201ENST00000622750 2735 ntBASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 TUBB8P6-201ENST00000436895 1288 ntBASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4Y2Q8TD47 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms