Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 ELK2BP-201ENST00000415014 1224 ntBASIC17.23■□□□□ 0.35
CHD6Q8TD26 FGFR3P6-201ENST00000457012 610 ntBASIC17.23■□□□□ 0.35
CHD6Q8TD26 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.23■□□□□ 0.35
CHD6Q8TD26 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD6Q8TD26 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHD6Q8TD26 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.23■□□□□ 0.35
CHD6Q8TD26 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.23■□□□□ 0.35
CHD6Q8TD26 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 RPS2P28-201ENST00000314255 741 ntBASIC17.22■□□□□ 0.35
CHD6Q8TD26 AL160286.2-201ENST00000567150 934 ntBASIC17.22■□□□□ 0.35
CHD6Q8TD26 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 AC004945.1-201ENST00000416738 983 ntBASIC17.22■□□□□ 0.35
CHD6Q8TD26 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 AC005498.2-205ENST00000593218 784 ntBASIC17.22■□□□□ 0.35
CHD6Q8TD26 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD6Q8TD26 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD6Q8TD26 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD6Q8TD26 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 AC005332.3-201ENST00000589904 676 ntBASIC17.21■□□□□ 0.35
CHD6Q8TD26 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD6Q8TD26 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD6Q8TD26 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD6Q8TD26 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD6Q8TD26 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD6Q8TD26 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD6Q8TD26 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD6Q8TD26 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 MIR3917-201ENST00000580971 93 ntBASIC17.21■□□□□ 0.35
CHD6Q8TD26 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD6Q8TD26 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CHD6Q8TD26 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.21■□□□□ 0.34
CHD6Q8TD26 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 AL078644.1-201ENST00000609881 752 ntBASIC17.2■□□□□ 0.34
CHD6Q8TD26 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 KRT8P11-201ENST00000409686 1436 ntBASIC17.2■□□□□ 0.34
CHD6Q8TD26 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD6Q8TD26 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD6Q8TD26 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD6Q8TD26 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD6Q8TD26 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 MIR6799-201ENST00000620297 69 ntBASIC17.19■□□□□ 0.34
CHD6Q8TD26 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD6Q8TD26 AC242852.2-201ENST00000615738 1807 ntBASIC17.19■□□□□ 0.34
CHD6Q8TD26 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD6Q8TD26 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms