Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 AC148477.8-201ENST00000624298 468 ntBASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 RNPS1P1-201ENST00000507437 918 ntBASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 AP001160.2-201ENST00000596071 487 ntBASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 MCCD1P1-208ENST00000445732 328 ntBASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 AC027796.2-201ENST00000575326 344 ntBASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 BNIP3P18-201ENST00000593976 575 ntBASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALMS1Q8TCU4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 KRT18P23-201ENST00000435622 1283 ntBASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 AC064862.7-201ENST00000604520 867 ntBASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ALMS1Q8TCU4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 MIR3180-5-201ENST00000583743 153 ntBASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 AL691403.2-201ENST00000618460 490 ntBASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms