Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 AL020996.1-203ENST00000536896 2307 ntBASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 BCL2-203ENST00000589955 5011 ntBASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 MIR6786-201ENST00000616843 113 ntBASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 AC011298.2-201ENST00000617989 482 ntBASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 AC130371.2-201ENST00000619443 611 ntBASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 BX323043.1-201ENST00000641006 1765 ntBASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.19■□□□□ 0.5
SRFBP1Q8NEF9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 TSPY23P-201ENST00000440136 739 ntBASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 AC091390.4-202ENST00000476426 537 ntBASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 NUDT16P1-203ENST00000513809 620 ntBASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 AC113410.3-201ENST00000623366 203 ntBASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SRFBP1Q8NEF9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms