Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CARFQ8N187 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CARFQ8N187 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CARFQ8N187 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CARFQ8N187 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CARFQ8N187 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CARFQ8N187 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.1■□□□□ 0.49
CARFQ8N187 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.1■□□□□ 0.49
CARFQ8N187 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.1■□□□□ 0.49
CARFQ8N187 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.1■□□□□ 0.49
CARFQ8N187 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.1■□□□□ 0.49
CARFQ8N187 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CARFQ8N187 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
CARFQ8N187 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.1■□□□□ 0.49
CARFQ8N187 MCCD1P1-208ENST00000445732 328 ntBASIC18.1■□□□□ 0.49
CARFQ8N187 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.1■□□□□ 0.49
CARFQ8N187 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.1■□□□□ 0.49
CARFQ8N187 NTF6B-201ENST00000591913 560 ntBASIC18.1■□□□□ 0.49
CARFQ8N187 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 MYC-208ENST00000641036 567 ntBASIC18.1■□□□□ 0.49
CARFQ8N187 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.1■□□□□ 0.49
CARFQ8N187 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CARFQ8N187 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CARFQ8N187 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.09■□□□□ 0.49
CARFQ8N187 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.09■□□□□ 0.49
CARFQ8N187 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.09■□□□□ 0.49
CARFQ8N187 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.09■□□□□ 0.49
CARFQ8N187 AL023284.2-201ENST00000405850 579 ntBASIC18.09■□□□□ 0.49
CARFQ8N187 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.09■□□□□ 0.49
CARFQ8N187 AC009947.2-201ENST00000444014 672 ntBASIC18.09■□□□□ 0.49
CARFQ8N187 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.09■□□□□ 0.49
CARFQ8N187 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.09■□□□□ 0.49
CARFQ8N187 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.09■□□□□ 0.49
CARFQ8N187 MIR3180-5-201ENST00000583743 153 ntBASIC18.09■□□□□ 0.49
CARFQ8N187 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 AC141586.3-201ENST00000562166 1838 ntBASIC18.09■□□□□ 0.49
CARFQ8N187 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.09■□□□□ 0.49
CARFQ8N187 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CARFQ8N187 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CARFQ8N187 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CARFQ8N187 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CARFQ8N187 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CARFQ8N187 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CARFQ8N187 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.08■□□□□ 0.49
CARFQ8N187 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CARFQ8N187 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CARFQ8N187 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CARFQ8N187 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.08■□□□□ 0.49
CARFQ8N187 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CARFQ8N187 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.49
CARFQ8N187 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CARFQ8N187 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CARFQ8N187 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.08■□□□□ 0.48
CARFQ8N187 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.08■□□□□ 0.48
CARFQ8N187 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.08■□□□□ 0.48
CARFQ8N187 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CARFQ8N187 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.08■□□□□ 0.48
CARFQ8N187 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CARFQ8N187 GPAT2P1-201ENST00000444924 1672 ntBASIC18.08■□□□□ 0.48
CARFQ8N187 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CARFQ8N187 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.08■□□□□ 0.48
CARFQ8N187 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.08■□□□□ 0.48
CARFQ8N187 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CARFQ8N187 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.07■□□□□ 0.48
CARFQ8N187 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CARFQ8N187 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CARFQ8N187 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.07■□□□□ 0.48
CARFQ8N187 AL109659.2-201ENST00000606809 1674 ntBASIC18.07■□□□□ 0.48
CARFQ8N187 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.07■□□□□ 0.48
CARFQ8N187 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.07■□□□□ 0.48
CARFQ8N187 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms