Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 AP000525.1-201ENST00000608286 694 ntBASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 DGCR10-201ENST00000609839 495 ntBASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 FEM1AP3-201ENST00000403722 1741 ntBASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.06■□□□□ 0.8
SCUBE3Q8IX30 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 FP475955.4-201ENST00000623131 1990 ntBASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 CRYGFP-201ENST00000418459 633 ntBASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 CKBP1-201ENST00000565489 1086 ntBASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SCUBE3Q8IX30 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 AL390955.1-201ENST00000428694 934 ntBASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 PRSS44-201ENST00000515154 1146 ntBASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCUBE3Q8IX30 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCUBE3Q8IX30 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCUBE3Q8IX30 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SCUBE3Q8IX30 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCUBE3Q8IX30 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCUBE3Q8IX30 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCUBE3Q8IX30 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms