Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 MIR4651-201ENST00000582622 73 ntBASIC21.53■■□□□ 1.04
SHC4Q6S5L8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 AC006058.3-201ENST00000606217 1069 ntBASIC21.52■■□□□ 1.04
SHC4Q6S5L8 AC110285.5-201ENST00000611501 352 ntBASIC21.52■■□□□ 1.04
SHC4Q6S5L8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SHC4Q6S5L8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
SHC4Q6S5L8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SHC4Q6S5L8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SHC4Q6S5L8 AC005082.1-201ENST00000413042 2259 ntBASIC21.52■■□□□ 1.03
SHC4Q6S5L8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SHC4Q6S5L8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 POU5F1P3-201ENST00000428824 1078 ntBASIC21.51■■□□□ 1.03
SHC4Q6S5L8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC4Q6S5L8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 ANO7L1-203ENST00000602586 1720 ntBASIC21.5■■□□□ 1.03
SHC4Q6S5L8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 AL445675.2-201ENST00000620291 557 ntBASIC21.5■■□□□ 1.03
SHC4Q6S5L8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHC4Q6S5L8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms