Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S3Q6QNY0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.21■□□□□ 0.5
BLOC1S3Q6QNY0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 MIR663A-201ENST00000385250 93 ntBASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 MIR5787-201ENST00000611784 55 ntBASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S3Q6QNY0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 AC026185.1-201ENST00000445748 174 ntBASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 AC092368.3-202ENST00000574180 1591 ntBASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BLOC1S3Q6QNY0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 AL121829.2-201ENST00000620908 328 ntBASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 HLA-B-256ENST00000639848 1089 ntBASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BLOC1S3Q6QNY0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 AC073592.3-201ENST00000625118 1834 ntBASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 CROCCP5-201ENST00000436658 830 ntBASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 AC120498.8-201ENST00000614275 531 ntBASIC18.17■□□□□ 0.5
BLOC1S3Q6QNY0 AC244517.3-201ENST00000616254 1235 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms