Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 TUBB8P6-201ENST00000436895 1288 ntBASIC17.36■□□□□ 0.37
NIPAL3Q6P499 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 AC124016.1-201ENST00000609552 612 ntBASIC17.36■□□□□ 0.37
NIPAL3Q6P499 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 PRORSD1P-201ENST00000295112 541 ntBASIC17.35■□□□□ 0.37
NIPAL3Q6P499 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 RPPH1-201ENST00000516869 333 ntBASIC17.35■□□□□ 0.37
NIPAL3Q6P499 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 FAM197Y4-202ENST00000622692 608 ntBASIC17.35■□□□□ 0.37
NIPAL3Q6P499 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NIPAL3Q6P499 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 KRT18P16-201ENST00000510337 1294 ntBASIC17.34■□□□□ 0.37
NIPAL3Q6P499 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 AC110285.5-201ENST00000611501 352 ntBASIC17.34■□□□□ 0.37
NIPAL3Q6P499 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NIPAL3Q6P499 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.33■□□□□ 0.37
NIPAL3Q6P499 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 AC104581.1-202ENST00000635932 2618 ntBASIC17.33■□□□□ 0.36
NIPAL3Q6P499 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 AL359736.2-201ENST00000621992 437 ntBASIC17.33■□□□□ 0.36
NIPAL3Q6P499 AC009113.1-201ENST00000570267 2443 ntBASIC17.33■□□□□ 0.36
NIPAL3Q6P499 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms