Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 AC021087.4-201ENST00000563761 564 ntBASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 FAM99A-202ENST00000538190 1989 ntBASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL13A1Q5TAT6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 AC127496.7-201ENST00000625110 1798 ntBASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 MIR6799-201ENST00000620297 69 ntBASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
COL13A1Q5TAT6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.48■■□□□ 1.03
COL13A1Q5TAT6 KRT8P3-201ENST00000519669 1449 ntBASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 MRPL20P1-201ENST00000400819 433 ntBASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 KRT18P23-201ENST00000435622 1283 ntBASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 AC005336.2-201ENST00000593183 939 ntBASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 AC242852.2-201ENST00000615738 1807 ntBASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.47■■□□□ 1.03
COL13A1Q5TAT6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL13A1Q5TAT6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.03
COL13A1Q5TAT6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms