Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 AF186192.3-201ENST00000583427 947 ntBASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 AC233702.5-201ENST00000584107 538 ntBASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 AP006294.2-201ENST00000641667 209 ntBASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KHDC1Q4VXA5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 AC018470.1-201ENST00000624790 3129 ntBASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 KRT8P8-201ENST00000434750 1448 ntBASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 AC012618.2-201ENST00000428058 849 ntBASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 RPS2P4-201ENST00000476944 856 ntBASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.28■□□□□ 0.68
KHDC1Q4VXA5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 FZD10-202ENST00000539839 3282 ntBASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 AC113410.3-201ENST00000623366 203 ntBASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 AC104581.1-202ENST00000635932 2618 ntBASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.27■□□□□ 0.68
KHDC1Q4VXA5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KHDC1Q4VXA5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KHDC1Q4VXA5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KHDC1Q4VXA5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KHDC1Q4VXA5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms