Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA4P43681 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA4P43681 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA4P43681 AL049637.2-201ENST00000641778 930 ntBASIC19.26■□□□□ 0.67
CHRNA4P43681 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA4P43681 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA4P43681 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA4P43681 KRT8P11-201ENST00000409686 1436 ntBASIC19.25■□□□□ 0.67
CHRNA4P43681 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA4P43681 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA4P43681 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA4P43681 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA4P43681 AC006333.2-201ENST00000607957 2099 ntBASIC19.25■□□□□ 0.67
CHRNA4P43681 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA4P43681 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA4P43681 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA4P43681 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRNA4P43681 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA4P43681 MESTP1-201ENST00000404287 994 ntBASIC19.25■□□□□ 0.67
CHRNA4P43681 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA4P43681 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA4P43681 AC008550.1-201ENST00000511500 884 ntBASIC19.25■□□□□ 0.67
CHRNA4P43681 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRNA4P43681 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA4P43681 AC011298.2-201ENST00000617989 482 ntBASIC19.25■□□□□ 0.67
CHRNA4P43681 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA4P43681 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHRNA4P43681 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA4P43681 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA4P43681 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA4P43681 AC093503.3-201ENST00000624917 2352 ntBASIC19.25■□□□□ 0.67
CHRNA4P43681 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA4P43681 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHRNA4P43681 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 AC004951.3-201ENST00000418645 1148 ntBASIC19.24■□□□□ 0.67
CHRNA4P43681 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNA4P43681 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNA4P43681 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNA4P43681 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA4P43681 AC026271.3-201ENST00000571884 352 ntBASIC19.24■□□□□ 0.67
CHRNA4P43681 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHRNA4P43681 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.24■□□□□ 0.67
CHRNA4P43681 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHRNA4P43681 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHRNA4P43681 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA4P43681 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHRNA4P43681 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CHRNA4P43681 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA4P43681 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA4P43681 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA4P43681 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA4P43681 B3GAT3P1-201ENST00000471720 806 ntBASIC19.23■□□□□ 0.67
CHRNA4P43681 MIR6786-201ENST00000616843 113 ntBASIC19.23■□□□□ 0.67
CHRNA4P43681 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA4P43681 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 AL020996.1-203ENST00000536896 2307 ntBASIC19.23■□□□□ 0.67
CHRNA4P43681 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHRNA4P43681 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA4P43681 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA4P43681 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CHRNA4P43681 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA4P43681 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.22■□□□□ 0.67
CHRNA4P43681 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CHRNA4P43681 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA4P43681 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA4P43681 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms